Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAI1Q7Z5J4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 RASA4DP-201ENST00000460726 1199 ntBASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 SEC1P-202ENST00000473944 940 ntBASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AC093525.10-201ENST00000625130 1569 ntBASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAI1Q7Z5J4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.16■□□□□ 0.18
RAI1Q7Z5J4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 HLA-F-220ENST00000434407 884 ntBASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.15■□□□□ 0.18
RAI1Q7Z5J4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms