Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CSMD2Q7Z408 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 AC091607.1-201ENST00000490318 1060 ntBASIC15.99■□□□□ 0.15
CSMD2Q7Z408 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 AL049840.3-201ENST00000602669 611 ntBASIC15.99■□□□□ 0.15
CSMD2Q7Z408 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CSMD2Q7Z408 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.98■□□□□ 0.15
CSMD2Q7Z408 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 AC006128.1-201ENST00000624704 1661 ntBASIC15.98■□□□□ 0.15
CSMD2Q7Z408 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CSMD2Q7Z408 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 AL512408.1-201ENST00000569378 2000 ntBASIC15.97■□□□□ 0.15
CSMD2Q7Z408 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.97■□□□□ 0.15
CSMD2Q7Z408 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 NSUN5P1-202ENST00000421140 1535 ntBASIC15.97■□□□□ 0.15
CSMD2Q7Z408 NSUN5P2-203ENST00000457352 1529 ntBASIC15.97■□□□□ 0.15
CSMD2Q7Z408 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CSMD2Q7Z408 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.96■□□□□ 0.15
CSMD2Q7Z408 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.96■□□□□ 0.15
CSMD2Q7Z408 MIR3917-201ENST00000580971 93 ntBASIC15.96■□□□□ 0.15
CSMD2Q7Z408 AP005212.1-201ENST00000581547 1997 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms