Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SHFQ7M4L6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SHFQ7M4L6 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.14■□□□□ 0.34
SHFQ7M4L6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.14■□□□□ 0.34
SHFQ7M4L6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 YBX1P10-201ENST00000444752 975 ntBASIC17.14■□□□□ 0.33
SHFQ7M4L6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 HLA-B-256ENST00000639848 1089 ntBASIC17.14■□□□□ 0.33
SHFQ7M4L6 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 NOC2LP1-202ENST00000452600 2235 ntBASIC17.14■□□□□ 0.33
SHFQ7M4L6 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 AP006587.1-201ENST00000534129 1502 ntBASIC17.14■□□□□ 0.33
SHFQ7M4L6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SHFQ7M4L6 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.14■□□□□ 0.33
SHFQ7M4L6 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.13■□□□□ 0.33
SHFQ7M4L6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 AC092368.3-202ENST00000574180 1591 ntBASIC17.13■□□□□ 0.33
SHFQ7M4L6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 ANO7L1-203ENST00000602586 1720 ntBASIC17.13■□□□□ 0.33
SHFQ7M4L6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.13■□□□□ 0.33
SHFQ7M4L6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SHFQ7M4L6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.12■□□□□ 0.33
SHFQ7M4L6 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SHFQ7M4L6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SHFQ7M4L6 KRT8P8-201ENST00000434750 1448 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms