Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.17■□□□□ 0.66
PACS1Q6VY07 FAM197Y4-202ENST00000622692 608 ntBASIC19.17■□□□□ 0.66
PACS1Q6VY07 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PACS1Q6VY07 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 AC142381.4-202ENST00000563973 229 ntBASIC19.16■□□□□ 0.66
PACS1Q6VY07 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 AL353708.3-201ENST00000610272 989 ntBASIC19.16■□□□□ 0.66
PACS1Q6VY07 HLA-A-209ENST00000638375 975 ntBASIC19.16■□□□□ 0.66
PACS1Q6VY07 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.16■□□□□ 0.66
PACS1Q6VY07 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PACS1Q6VY07 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 AL353807.1-201ENST00000427475 662 ntBASIC19.15■□□□□ 0.66
PACS1Q6VY07 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 RARRES2P10-201ENST00000564312 460 ntBASIC19.15■□□□□ 0.66
PACS1Q6VY07 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PACS1Q6VY07 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PACS1Q6VY07 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.66
PACS1Q6VY07 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 HTR7P1-201ENST00000538670 1336 ntBASIC19.14■□□□□ 0.65
PACS1Q6VY07 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PACS1Q6VY07 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.14■□□□□ 0.65
PACS1Q6VY07 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 NIFKP9-201ENST00000419265 221 ntBASIC19.13■□□□□ 0.65
PACS1Q6VY07 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PACS1Q6VY07 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.13■□□□□ 0.65
PACS1Q6VY07 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms