Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 MIR1238-201ENST00000408483 83 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 TSPY23P-201ENST00000440136 739 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 KRT8P11-201ENST00000409686 1436 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 TEX21P-204ENST00000641479 1693 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.7■□□□□ 0.42
HLA-DQA1Q5Y7H0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HLA-DQA1Q5Y7H0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 CKBP1-201ENST00000565489 1086 ntBASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HLA-DQA1Q5Y7H0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.67■□□□□ 0.42
HLA-DQA1Q5Y7H0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms