Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR2Q01850 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDR2Q01850 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR2Q01850 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR2Q01850 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR2Q01850 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.22■□□□□ 0.83
CDR2Q01850 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR2Q01850 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.22■□□□□ 0.83
CDR2Q01850 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.22■□□□□ 0.83
CDR2Q01850 AL031985.4-201ENST00000642138 673 ntBASIC20.22■□□□□ 0.83
CDR2Q01850 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR2Q01850 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.22■□□□□ 0.83
CDR2Q01850 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDR2Q01850 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CDR2Q01850 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.21■□□□□ 0.83
CDR2Q01850 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDR2Q01850 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDR2Q01850 AC004951.3-201ENST00000418645 1148 ntBASIC20.21■□□□□ 0.83
CDR2Q01850 PRSS44-201ENST00000515154 1146 ntBASIC20.21■□□□□ 0.83
CDR2Q01850 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.21■□□□□ 0.83
CDR2Q01850 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDR2Q01850 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.21■□□□□ 0.83
CDR2Q01850 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDR2Q01850 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.21■□□□□ 0.83
CDR2Q01850 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.21■□□□□ 0.83
CDR2Q01850 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.21■□□□□ 0.83
CDR2Q01850 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.21■□□□□ 0.83
CDR2Q01850 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDR2Q01850 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CDR2Q01850 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR2Q01850 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDR2Q01850 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.2■□□□□ 0.82
CDR2Q01850 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 AC098590.1-201ENST00000468126 897 ntBASIC20.2■□□□□ 0.82
CDR2Q01850 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.2■□□□□ 0.82
CDR2Q01850 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.2■□□□□ 0.82
CDR2Q01850 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.2■□□□□ 0.82
CDR2Q01850 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.2■□□□□ 0.82
CDR2Q01850 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.2■□□□□ 0.82
CDR2Q01850 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CDR2Q01850 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.2■□□□□ 0.82
CDR2Q01850 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDR2Q01850 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.19■□□□□ 0.82
CDR2Q01850 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDR2Q01850 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDR2Q01850 AC142381.4-202ENST00000563973 229 ntBASIC20.19■□□□□ 0.82
CDR2Q01850 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.19■□□□□ 0.82
CDR2Q01850 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.19■□□□□ 0.82
CDR2Q01850 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CDR2Q01850 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDR2Q01850 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR2Q01850 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR2Q01850 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDR2Q01850 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDR2Q01850 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDR2Q01850 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDR2Q01850 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDR2Q01850 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CDR2Q01850 AC008040.2-201ENST00000461049 708 ntBASIC20.18■□□□□ 0.82
CDR2Q01850 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.18■□□□□ 0.82
CDR2Q01850 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.18■□□□□ 0.82
CDR2Q01850 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.18■□□□□ 0.82
CDR2Q01850 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms