Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.61□□□□□ -0.07
SNRPEP62304 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SNRPEP62304 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 AP001094.4-201ENST00000579008 2176 ntBASIC14.61□□□□□ -0.07
SNRPEP62304 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.61□□□□□ -0.07
SNRPEP62304 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNRPEP62304 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SNRPEP62304 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
SNRPEP62304 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
SNRPEP62304 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.61□□□□□ -0.07
SNRPEP62304 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
SNRPEP62304 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
SNRPEP62304 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SNRPEP62304 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 DUX4L11-201ENST00000611504 1267 ntBASIC14.59□□□□□ -0.07
SNRPEP62304 DUX4L12-201ENST00000614593 1267 ntBASIC14.59□□□□□ -0.07
SNRPEP62304 DUX4L14-201ENST00000621227 1267 ntBASIC14.59□□□□□ -0.07
SNRPEP62304 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
SNRPEP62304 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SNRPEP62304 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.59□□□□□ -0.07
SNRPEP62304 AL121761.2-201ENST00000598007 1648 ntBASIC14.59□□□□□ -0.07
SNRPEP62304 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SNRPEP62304 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
SNRPEP62304 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SNRPEP62304 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SNRPEP62304 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SNRPEP62304 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SNRPEP62304 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
SNRPEP62304 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
SNRPEP62304 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.58□□□□□ -0.07
SNRPEP62304 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNRPEP62304 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SNRPEP62304 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SNRPEP62304 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
SNRPEP62304 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
SNRPEP62304 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SNRPEP62304 AC141586.3-201ENST00000562166 1838 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms