Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 AC092850.2-201ENST00000623821 2697 ntBASIC13.25□□□□□ -0.29
CKS1BP61024 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.25□□□□□ -0.29
CKS1BP61024 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CKS1BP61024 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CKS1BP61024 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 AC019069.1-201ENST00000610008 1333 ntBASIC13.24□□□□□ -0.29
CKS1BP61024 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.24□□□□□ -0.29
CKS1BP61024 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 CASP6-205ENST00000505486 538 ntTSL 4 BASIC13.24□□□□□ -0.29
CKS1BP61024 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.24□□□□□ -0.29
CKS1BP61024 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.24□□□□□ -0.29
CKS1BP61024 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 TREX1-205ENST00000625293 1783 ntBASIC13.24□□□□□ -0.29
CKS1BP61024 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CKS1BP61024 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CKS1BP61024 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.24□□□□□ -0.29
CKS1BP61024 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 NOC2LP2-201ENST00000407594 1944 ntBASIC13.23□□□□□ -0.29
CKS1BP61024 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CKS1BP61024 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.23□□□□□ -0.29
CKS1BP61024 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CKS1BP61024 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 AL136379.1-201ENST00000623471 2642 ntBASIC13.23□□□□□ -0.29
CKS1BP61024 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CKS1BP61024 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms