Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AC117947.1-201ENST00000427448 529 ntBASIC21.63■■□□□ 1.05
CHMP4BP1P59074 Z85996.1-201ENST00000494644 937 ntBASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.63■■□□□ 1.05
CHMP4BP1P59074 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AL160286.2-201ENST00000567150 934 ntBASIC21.62■■□□□ 1.05
CHMP4BP1P59074 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHMP4BP1P59074 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 AC022616.7-201ENST00000525383 220 ntBASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHMP4BP1P59074 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 AC007663.1-201ENST00000438948 1240 ntBASIC21.6■■□□□ 1.05
CHMP4BP1P59074 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 AP001271.2-201ENST00000624018 1556 ntBASIC21.6■■□□□ 1.05
CHMP4BP1P59074 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP4BP1P59074 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms