Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 FBXW4P1-201ENST00000426721 2239 ntBASIC15.68■□□□□ 0.1
RIPPLY3P57055 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 AL645939.2-201ENST00000427340 991 ntBASIC15.68■□□□□ 0.1
RIPPLY3P57055 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 SPCS2P1-201ENST00000561636 679 ntBASIC15.68■□□□□ 0.1
RIPPLY3P57055 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RIPPLY3P57055 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
RIPPLY3P57055 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 MED15P5-201ENST00000423150 992 ntBASIC15.67■□□□□ 0.1
RIPPLY3P57055 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AF238378.1-201ENST00000526806 358 ntBASIC15.67■□□□□ 0.1
RIPPLY3P57055 AC190387.1-201ENST00000551683 408 ntBASIC15.67■□□□□ 0.1
RIPPLY3P57055 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AC009065.1-201ENST00000564055 1225 ntBASIC15.67■□□□□ 0.1
RIPPLY3P57055 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AC080038.3-201ENST00000623346 1952 ntBASIC15.67■□□□□ 0.1
RIPPLY3P57055 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RIPPLY3P57055 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
RIPPLY3P57055 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 AP006288.1-201ENST00000446065 395 ntBASIC15.66■□□□□ 0.1
RIPPLY3P57055 SCARNA2-201ENST00000458748 420 ntBASIC15.66■□□□□ 0.1
RIPPLY3P57055 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 AC092597.1-201ENST00000487352 616 ntBASIC15.66■□□□□ 0.1
RIPPLY3P57055 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 AC074051.2-201ENST00000565115 352 ntBASIC15.66■□□□□ 0.1
RIPPLY3P57055 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 AL356488.2-201ENST00000602755 427 ntBASIC15.66■□□□□ 0.1
RIPPLY3P57055 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RIPPLY3P57055 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RIPPLY3P57055 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.65■□□□□ 0.1
RIPPLY3P57055 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RIPPLY3P57055 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms