Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.68■□□□□ 0.42
CDH12P55289 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH12P55289 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDH12P55289 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDH12P55289 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CDH12P55289 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CDH12P55289 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH12P55289 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH12P55289 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH12P55289 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH12P55289 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CDH12P55289 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH12P55289 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH12P55289 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 UNC93B4-201ENST00000505679 747 ntBASIC17.67■□□□□ 0.42
CDH12P55289 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH12P55289 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH12P55289 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.67■□□□□ 0.42
CDH12P55289 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.67■□□□□ 0.42
CDH12P55289 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.67■□□□□ 0.42
CDH12P55289 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDH12P55289 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CDH12P55289 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDH12P55289 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH12P55289 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH12P55289 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH12P55289 AL355802.2-201ENST00000402069 882 ntBASIC17.66■□□□□ 0.42
CDH12P55289 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.66■□□□□ 0.42
CDH12P55289 KRT18P16-201ENST00000510337 1294 ntBASIC17.66■□□□□ 0.42
CDH12P55289 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH12P55289 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDH12P55289 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDH12P55289 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
CDH12P55289 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDH12P55289 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH12P55289 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CDH12P55289 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDH12P55289 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.65■□□□□ 0.42
CDH12P55289 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 HLA-L-209ENST00000420110 1011 ntBASIC17.65■□□□□ 0.42
CDH12P55289 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.65■□□□□ 0.42
CDH12P55289 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms