Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NCKAP1LP55160 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NCKAP1LP55160 KRT18P22-201ENST00000402024 1347 ntBASIC20.78■□□□□ 0.92
NCKAP1LP55160 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 KRT8P32-201ENST00000512863 1461 ntBASIC20.77■□□□□ 0.92
NCKAP1LP55160 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 ECEL1P2-202ENST00000465689 757 ntBASIC20.77■□□□□ 0.92
NCKAP1LP55160 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NCKAP1LP55160 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.77■□□□□ 0.92
NCKAP1LP55160 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 GPAT2P1-201ENST00000444924 1672 ntBASIC20.76■□□□□ 0.91
NCKAP1LP55160 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
NCKAP1LP55160 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
NCKAP1LP55160 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 LINC01023-201ENST00000606054 436 ntBASIC20.75■□□□□ 0.91
NCKAP1LP55160 AC068587.9-201ENST00000641814 219 ntBASIC20.75■□□□□ 0.91
NCKAP1LP55160 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NCKAP1LP55160 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.75■□□□□ 0.91
NCKAP1LP55160 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AC006333.2-201ENST00000607957 2099 ntBASIC20.74■□□□□ 0.91
NCKAP1LP55160 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AL023284.2-201ENST00000405850 579 ntBASIC20.74■□□□□ 0.91
NCKAP1LP55160 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.74■□□□□ 0.91
NCKAP1LP55160 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 AC083906.6-201ENST00000641366 219 ntBASIC20.74■□□□□ 0.91
NCKAP1LP55160 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.74■□□□□ 0.91
NCKAP1LP55160 BX323043.1-201ENST00000641006 1765 ntBASIC20.74■□□□□ 0.91
NCKAP1LP55160 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NCKAP1LP55160 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms