Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
APOC4P55056 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.91□□□□□ -0.18
APOC4P55056 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
APOC4P55056 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.91□□□□□ -0.18
APOC4P55056 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC4P55056 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC4P55056 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC13.9□□□□□ -0.18
APOC4P55056 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOC4P55056 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 DUX4L26-201ENST00000489078 1255 ntBASIC13.9□□□□□ -0.18
APOC4P55056 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.9□□□□□ -0.18
APOC4P55056 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
APOC4P55056 AC141257.4-201ENST00000634557 245 ntBASIC13.9□□□□□ -0.18
APOC4P55056 AC136944.6-201ENST00000634818 245 ntBASIC13.9□□□□□ -0.18
APOC4P55056 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
APOC4P55056 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC4P55056 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.9□□□□□ -0.18
APOC4P55056 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 TREX1-205ENST00000625293 1783 ntBASIC13.9□□□□□ -0.18
APOC4P55056 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.9□□□□□ -0.18
APOC4P55056 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOC4P55056 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
APOC4P55056 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 ARMC10P1-201ENST00000313754 855 ntBASIC13.89□□□□□ -0.19
APOC4P55056 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.89□□□□□ -0.19
APOC4P55056 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.89□□□□□ -0.19
APOC4P55056 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
APOC4P55056 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 PWWP2AP1-201ENST00000429776 2273 ntBASIC13.89□□□□□ -0.19
APOC4P55056 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOC4P55056 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
APOC4P55056 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOC4P55056 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOC4P55056 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.88□□□□□ -0.19
APOC4P55056 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.88□□□□□ -0.19
APOC4P55056 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.88□□□□□ -0.19
APOC4P55056 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms