Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.34■□□□□ 0.69
ATXN3P54252 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
ATXN3P54252 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ATXN3P54252 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.34■□□□□ 0.69
ATXN3P54252 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATXN3P54252 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATXN3P54252 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
ATXN3P54252 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ATXN3P54252 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATXN3P54252 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.33■□□□□ 0.69
ATXN3P54252 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.33■□□□□ 0.69
ATXN3P54252 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ATXN3P54252 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 YBX1P10-201ENST00000444752 975 ntBASIC19.33■□□□□ 0.68
ATXN3P54252 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATXN3P54252 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.33■□□□□ 0.68
ATXN3P54252 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ATXN3P54252 AC139887.4-201ENST00000607877 719 ntBASIC19.33■□□□□ 0.68
ATXN3P54252 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ATXN3P54252 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.33■□□□□ 0.68
ATXN3P54252 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ATXN3P54252 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATXN3P54252 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ATXN3P54252 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.32■□□□□ 0.68
ATXN3P54252 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.32■□□□□ 0.68
ATXN3P54252 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.32■□□□□ 0.68
ATXN3P54252 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.32■□□□□ 0.68
ATXN3P54252 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATXN3P54252 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATXN3P54252 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATXN3P54252 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.31■□□□□ 0.68
ATXN3P54252 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.31■□□□□ 0.68
ATXN3P54252 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 FAM8A6P-201ENST00000407496 1135 ntBASIC19.31■□□□□ 0.68
ATXN3P54252 FAM207BP-201ENST00000447172 505 ntBASIC19.31■□□□□ 0.68
ATXN3P54252 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.31■□□□□ 0.68
ATXN3P54252 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 AC011298.2-201ENST00000617989 482 ntBASIC19.31■□□□□ 0.68
ATXN3P54252 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.31■□□□□ 0.68
ATXN3P54252 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.31■□□□□ 0.68
ATXN3P54252 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.31■□□□□ 0.68
ATXN3P54252 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.31■□□□□ 0.68
ATXN3P54252 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATXN3P54252 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATXN3P54252 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ATXN3P54252 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATXN3P54252 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.3■□□□□ 0.68
ATXN3P54252 INGX-201ENST00000359239 846 ntBASIC19.3■□□□□ 0.68
ATXN3P54252 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATXN3P54252 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
ATXN3P54252 TPM4P1-201ENST00000436100 807 ntBASIC19.3■□□□□ 0.68
ATXN3P54252 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.3■□□□□ 0.68
ATXN3P54252 KRT126P-201ENST00000549467 1181 ntBASIC19.3■□□□□ 0.68
ATXN3P54252 AP000692.2-201ENST00000608391 879 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms