Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2BBP33778 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2BBP33778 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
HIST1H2BBP33778 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 pRNA.6-201ENST00000610482 90 ntBASIC14.33□□□□□ -0.12
HIST1H2BBP33778 pRNA.5-201ENST00000612139 90 ntBASIC14.33□□□□□ -0.12
HIST1H2BBP33778 pRNA.11-201ENST00000618423 90 ntBASIC14.33□□□□□ -0.12
HIST1H2BBP33778 pRNA.13-201ENST00000619112 90 ntBASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H2BBP33778 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 LINC02199-201ENST00000506655 2702 ntBASIC14.32□□□□□ -0.12
HIST1H2BBP33778 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H2BBP33778 AC138028.4-201ENST00000564984 1845 ntBASIC14.31□□□□□ -0.12
HIST1H2BBP33778 HYMAI-201ENST00000635591 3347 ntBASIC14.31□□□□□ -0.12
HIST1H2BBP33778 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 AC061975.6-201ENST00000579045 1553 ntBASIC14.31□□□□□ -0.12
HIST1H2BBP33778 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H2BBP33778 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms