Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ABCD3P28288 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ABCD3P28288 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ABCD3P28288 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.48■□□□□ 0.39
ABCD3P28288 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.48■□□□□ 0.39
ABCD3P28288 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ABCD3P28288 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.48■□□□□ 0.39
ABCD3P28288 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 AL049812.1-201ENST00000432563 2267 ntBASIC17.47■□□□□ 0.39
ABCD3P28288 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.47■□□□□ 0.39
ABCD3P28288 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ABCD3P28288 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
ABCD3P28288 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.47■□□□□ 0.39
ABCD3P28288 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.47■□□□□ 0.39
ABCD3P28288 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ABCD3P28288 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.47■□□□□ 0.39
ABCD3P28288 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
ABCD3P28288 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ABCD3P28288 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.46■□□□□ 0.39
ABCD3P28288 LINC01568-207ENST00000641790 1380 ntBASIC17.46■□□□□ 0.39
ABCD3P28288 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ABCD3P28288 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 AC211429.1-201ENST00000415277 523 ntBASIC17.46■□□□□ 0.39
ABCD3P28288 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.46■□□□□ 0.39
ABCD3P28288 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.46■□□□□ 0.39
ABCD3P28288 AC145285.6-201ENST00000604632 637 ntBASIC17.46■□□□□ 0.39
ABCD3P28288 AL023803.3-201ENST00000615559 522 ntBASIC17.46■□□□□ 0.39
ABCD3P28288 AC116562.4-202ENST00000641738 218 ntBASIC17.46■□□□□ 0.39
ABCD3P28288 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ABCD3P28288 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.46■□□□□ 0.39
ABCD3P28288 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
ABCD3P28288 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ABCD3P28288 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
ABCD3P28288 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ABCD3P28288 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.45■□□□□ 0.38
ABCD3P28288 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ABCD3P28288 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 TSPY17P-201ENST00000450329 467 ntBASIC17.45■□□□□ 0.38
ABCD3P28288 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.45■□□□□ 0.38
ABCD3P28288 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.45■□□□□ 0.38
ABCD3P28288 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 KRT8P3-201ENST00000519669 1449 ntBASIC17.45■□□□□ 0.38
ABCD3P28288 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ABCD3P28288 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
ABCD3P28288 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms