Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 KRT16P5-201ENST00000455284 522 ntBASIC18.63■□□□□ 0.57
VARSP26640 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.63■□□□□ 0.57
VARSP26640 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 HLA-A-209ENST00000638375 975 ntBASIC18.63■□□□□ 0.57
VARSP26640 AL049637.2-201ENST00000641778 930 ntBASIC18.63■□□□□ 0.57
VARSP26640 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
VARSP26640 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
VARSP26640 TEX21P-204ENST00000641479 1693 ntBASIC18.63■□□□□ 0.57
VARSP26640 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
VARSP26640 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.62■□□□□ 0.57
VARSP26640 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.62■□□□□ 0.57
VARSP26640 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
VARSP26640 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.62■□□□□ 0.57
VARSP26640 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.62■□□□□ 0.57
VARSP26640 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.62■□□□□ 0.57
VARSP26640 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.62■□□□□ 0.57
VARSP26640 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VARSP26640 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
VARSP26640 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
VARSP26640 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
VARSP26640 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.61■□□□□ 0.57
VARSP26640 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.61■□□□□ 0.57
VARSP26640 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VARSP26640 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VARSP26640 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.61■□□□□ 0.57
VARSP26640 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VARSP26640 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.61■□□□□ 0.57
VARSP26640 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
VARSP26640 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VARSP26640 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.61■□□□□ 0.57
VARSP26640 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.6■□□□□ 0.57
VARSP26640 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
VARSP26640 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
VARSP26640 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.6■□□□□ 0.57
VARSP26640 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.6■□□□□ 0.57
VARSP26640 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.6■□□□□ 0.57
VARSP26640 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.6■□□□□ 0.57
VARSP26640 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.6■□□□□ 0.57
VARSP26640 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
VARSP26640 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VARSP26640 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.6■□□□□ 0.57
VARSP26640 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
VARSP26640 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VARSP26640 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
VARSP26640 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VARSP26640 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms