Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.3■□□□□ 0.68
NFKB1P19838 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NFKB1P19838 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
NFKB1P19838 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.29■□□□□ 0.68
NFKB1P19838 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
NFKB1P19838 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 FAM207BP-201ENST00000447172 505 ntBASIC19.29■□□□□ 0.68
NFKB1P19838 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.29■□□□□ 0.68
NFKB1P19838 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
NFKB1P19838 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.29■□□□□ 0.68
NFKB1P19838 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.29■□□□□ 0.68
NFKB1P19838 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NFKB1P19838 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NFKB1P19838 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
NFKB1P19838 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKB1P19838 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
NFKB1P19838 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKB1P19838 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKB1P19838 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKB1P19838 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKB1P19838 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.28■□□□□ 0.68
NFKB1P19838 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.28■□□□□ 0.68
NFKB1P19838 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKB1P19838 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKB1P19838 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.28■□□□□ 0.68
NFKB1P19838 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKB1P19838 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NFKB1P19838 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.28■□□□□ 0.68
NFKB1P19838 FSCN1P1-201ENST00000568912 1481 ntBASIC19.28■□□□□ 0.68
NFKB1P19838 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NFKB1P19838 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.27■□□□□ 0.68
NFKB1P19838 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.27■□□□□ 0.68
NFKB1P19838 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NFKB1P19838 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.27■□□□□ 0.68
NFKB1P19838 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NFKB1P19838 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.27■□□□□ 0.68
NFKB1P19838 NUDT16P1-203ENST00000513809 620 ntBASIC19.27■□□□□ 0.68
NFKB1P19838 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.27■□□□□ 0.68
NFKB1P19838 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.27■□□□□ 0.68
NFKB1P19838 AP001412.1-201ENST00000608405 714 ntBASIC19.27■□□□□ 0.68
NFKB1P19838 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 AC083906.6-201ENST00000641366 219 ntBASIC19.27■□□□□ 0.68
NFKB1P19838 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NFKB1P19838 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NFKB1P19838 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.27■□□□□ 0.67
NFKB1P19838 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NFKB1P19838 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
NFKB1P19838 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
NFKB1P19838 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NFKB1P19838 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
NFKB1P19838 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 AL512353.2-201ENST00000448759 1962 ntBASIC19.26■□□□□ 0.67
NFKB1P19838 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NFKB1P19838 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
NFKB1P19838 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.26■□□□□ 0.67
NFKB1P19838 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NFKB1P19838 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NFKB1P19838 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.26■□□□□ 0.67
NFKB1P19838 CKBP1-201ENST00000565489 1086 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms