Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
COL11A2P13942 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 RCC2P3-201ENST00000418112 1537 ntBASIC23.23■■□□□ 1.31
COL11A2P13942 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
COL11A2P13942 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.23■■□□□ 1.31
COL11A2P13942 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC23.23■■□□□ 1.31
COL11A2P13942 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 NUS1P2-201ENST00000417358 873 ntBASIC23.22■■□□□ 1.31
COL11A2P13942 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC23.22■■□□□ 1.31
COL11A2P13942 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.22■■□□□ 1.31
COL11A2P13942 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC23.22■■□□□ 1.31
COL11A2P13942 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC23.22■■□□□ 1.31
COL11A2P13942 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.22■■□□□ 1.31
COL11A2P13942 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
COL11A2P13942 IGHV3-47-201ENST00000425060 335 ntBASIC23.22■■□□□ 1.31
COL11A2P13942 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC23.22■■□□□ 1.31
COL11A2P13942 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.22■■□□□ 1.31
COL11A2P13942 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL11A2P13942 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 NSUN5P1-202ENST00000421140 1535 ntBASIC23.21■■□□□ 1.31
COL11A2P13942 NSUN5P2-203ENST00000457352 1529 ntBASIC23.21■■□□□ 1.31
COL11A2P13942 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.21■■□□□ 1.31
COL11A2P13942 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.21■■□□□ 1.31
COL11A2P13942 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL11A2P13942 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
COL11A2P13942 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC23.2■■□□□ 1.31
COL11A2P13942 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 PMS2P1-201ENST00000431037 1228 ntBASIC23.2■■□□□ 1.3
COL11A2P13942 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.2■■□□□ 1.3
COL11A2P13942 BX640515.1-201ENST00000617215 977 ntBASIC23.2■■□□□ 1.3
COL11A2P13942 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC23.2■■□□□ 1.3
COL11A2P13942 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
COL11A2P13942 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.2■■□□□ 1.3
COL11A2P13942 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
COL11A2P13942 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL11A2P13942 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.19■■□□□ 1.3
COL11A2P13942 IL9RP2-201ENST00000423948 1312 ntBASIC23.19■■□□□ 1.3
COL11A2P13942 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.19■■□□□ 1.3
COL11A2P13942 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.19■■□□□ 1.3
COL11A2P13942 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 AC007375.3-201ENST00000600936 2314 ntBASIC23.19■■□□□ 1.3
COL11A2P13942 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.19■■□□□ 1.3
COL11A2P13942 AF238378.1-201ENST00000526806 358 ntBASIC23.19■■□□□ 1.3
COL11A2P13942 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC23.19■■□□□ 1.3
COL11A2P13942 IGHV3OR16-7-201ENST00000604106 360 ntBASIC23.19■■□□□ 1.3
COL11A2P13942 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC23.19■■□□□ 1.3
COL11A2P13942 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL11A2P13942 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.18■■□□□ 1.3
COL11A2P13942 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
COL11A2P13942 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A2P13942 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.18■■□□□ 1.3
COL11A2P13942 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A2P13942 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A2P13942 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A2P13942 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.18■■□□□ 1.3
COL11A2P13942 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC23.18■■□□□ 1.3
COL11A2P13942 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.18■■□□□ 1.3
COL11A2P13942 NAT14-202ENST00000587400 416 ntTSL 5 BASIC23.18■■□□□ 1.3
COL11A2P13942 Z69720.1-201ENST00000601483 472 ntBASIC23.18■■□□□ 1.3
COL11A2P13942 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.18■■□□□ 1.3
COL11A2P13942 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL11A2P13942 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms