Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.57■■□□□ 1.04
COL11A1P12107 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.57■■□□□ 1.04
COL11A1P12107 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.57■■□□□ 1.04
COL11A1P12107 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL11A1P12107 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A1P12107 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
COL11A1P12107 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
COL11A1P12107 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
COL11A1P12107 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.57■■□□□ 1.04
COL11A1P12107 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
COL11A1P12107 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 AL136038.4-201ENST00000603606 1261 ntBASIC21.56■■□□□ 1.04
COL11A1P12107 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC21.56■■□□□ 1.04
COL11A1P12107 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A1P12107 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
COL11A1P12107 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.56■■□□□ 1.04
COL11A1P12107 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
COL11A1P12107 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.56■■□□□ 1.04
COL11A1P12107 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.55■■□□□ 1.04
COL11A1P12107 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL11A1P12107 AC016734.2-201ENST00000624325 1377 ntBASIC21.55■■□□□ 1.04
COL11A1P12107 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.55■■□□□ 1.04
COL11A1P12107 AC012615.1-201ENST00000565797 1299 ntBASIC21.55■■□□□ 1.04
COL11A1P12107 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL11A1P12107 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 AL162741.1-201ENST00000565563 1558 ntBASIC21.55■■□□□ 1.04
COL11A1P12107 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
COL11A1P12107 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL11A1P12107 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 BX276092.5-203ENST00000456199 560 ntBASIC21.55■■□□□ 1.04
COL11A1P12107 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.55■■□□□ 1.04
COL11A1P12107 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.55■■□□□ 1.04
COL11A1P12107 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL11A1P12107 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A1P12107 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A1P12107 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A1P12107 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
COL11A1P12107 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A1P12107 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.54■■□□□ 1.04
COL11A1P12107 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
COL11A1P12107 CHCHD2P8-201ENST00000429873 447 ntBASIC21.54■■□□□ 1.04
COL11A1P12107 AP002383.4-201ENST00000442518 975 ntBASIC21.54■■□□□ 1.04
COL11A1P12107 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
COL11A1P12107 RNF126P1-202ENST00000569893 925 ntBASIC21.54■■□□□ 1.04
COL11A1P12107 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
COL11A1P12107 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.54■■□□□ 1.04
COL11A1P12107 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 AL121672.3-201ENST00000608644 468 ntBASIC21.54■■□□□ 1.04
COL11A1P12107 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.54■■□□□ 1.04
COL11A1P12107 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
COL11A1P12107 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL11A1P12107 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.54■■□□□ 1.04
COL11A1P12107 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL11A1P12107 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.53■■□□□ 1.04
COL11A1P12107 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms