Protein–RNA interactions for Protein: P10909

CLU, Clusterin, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLUP10909 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CLUP10909 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.12■□□□□ 0.33
CLUP10909 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.12■□□□□ 0.33
CLUP10909 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CLUP10909 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.12■□□□□ 0.33
CLUP10909 TUBB8P6-201ENST00000436895 1288 ntBASIC17.12■□□□□ 0.33
CLUP10909 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.12■□□□□ 0.33
CLUP10909 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.12■□□□□ 0.33
CLUP10909 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CLUP10909 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLUP10909 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 AC090164.3-201ENST00000610780 2143 ntBASIC17.11■□□□□ 0.33
CLUP10909 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 FEM1AP3-201ENST00000403722 1741 ntBASIC17.11■□□□□ 0.33
CLUP10909 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
CLUP10909 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.11■□□□□ 0.33
CLUP10909 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.11■□□□□ 0.33
CLUP10909 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.11■□□□□ 0.33
CLUP10909 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.11■□□□□ 0.33
CLUP10909 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CLUP10909 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLUP10909 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CLUP10909 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLUP10909 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 AC026471.1-201ENST00000564629 3026 ntBASIC17.1■□□□□ 0.33
CLUP10909 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CLUP10909 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLUP10909 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.1■□□□□ 0.33
CLUP10909 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
CLUP10909 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 AC008687.6-201ENST00000596318 630 ntBASIC17.1■□□□□ 0.33
CLUP10909 AL121829.2-201ENST00000620908 328 ntBASIC17.1■□□□□ 0.33
CLUP10909 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
CLUP10909 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.1■□□□□ 0.33
CLUP10909 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLUP10909 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CLUP10909 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.1■□□□□ 0.33
CLUP10909 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLUP10909 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CLUP10909 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.09■□□□□ 0.33
CLUP10909 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLUP10909 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.09■□□□□ 0.33
CLUP10909 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.09■□□□□ 0.33
CLUP10909 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CLUP10909 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CLUP10909 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.09■□□□□ 0.33
CLUP10909 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.09■□□□□ 0.33
CLUP10909 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms