Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SRPRAP08240 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SRPRAP08240 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.17■□□□□ 0.66
SRPRAP08240 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SRPRAP08240 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.16■□□□□ 0.66
SRPRAP08240 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.16■□□□□ 0.66
SRPRAP08240 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 AC141586.3-201ENST00000562166 1838 ntBASIC19.16■□□□□ 0.66
SRPRAP08240 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SRPRAP08240 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SRPRAP08240 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPRAP08240 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SRPRAP08240 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.15■□□□□ 0.66
SRPRAP08240 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SRPRAP08240 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.15■□□□□ 0.66
SRPRAP08240 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.15■□□□□ 0.66
SRPRAP08240 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.15■□□□□ 0.66
SRPRAP08240 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.15■□□□□ 0.66
SRPRAP08240 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRPRAP08240 MIR3180-5-201ENST00000583743 153 ntBASIC19.15■□□□□ 0.66
SRPRAP08240 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SRPRAP08240 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SRPRAP08240 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRPRAP08240 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SRPRAP08240 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.15■□□□□ 0.66
SRPRAP08240 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.15■□□□□ 0.66
SRPRAP08240 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SRPRAP08240 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SRPRAP08240 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.66
SRPRAP08240 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.14■□□□□ 0.65
SRPRAP08240 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.14■□□□□ 0.65
SRPRAP08240 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SRPRAP08240 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.14■□□□□ 0.65
SRPRAP08240 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.14■□□□□ 0.65
SRPRAP08240 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.14■□□□□ 0.65
SRPRAP08240 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.14■□□□□ 0.65
SRPRAP08240 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
SRPRAP08240 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SRPRAP08240 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.14■□□□□ 0.65
SRPRAP08240 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
SRPRAP08240 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SRPRAP08240 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SRPRAP08240 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.14■□□□□ 0.65
SRPRAP08240 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SRPRAP08240 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SRPRAP08240 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.13■□□□□ 0.65
SRPRAP08240 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SRPRAP08240 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SRPRAP08240 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SRPRAP08240 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms