Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL5A2P05997 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
COL5A2P05997 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.99■■□□□ 1.59
COL5A2P05997 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.99■■□□□ 1.59
COL5A2P05997 AL109659.2-201ENST00000606809 1674 ntBASIC24.99■■□□□ 1.59
COL5A2P05997 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
COL5A2P05997 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
COL5A2P05997 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC24.99■■□□□ 1.59
COL5A2P05997 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.99■■□□□ 1.59
COL5A2P05997 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC24.99■■□□□ 1.59
COL5A2P05997 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
COL5A2P05997 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 DFFB-203ENST00000341385 572 ntTSL 5 BASIC24.98■■□□□ 1.59
COL5A2P05997 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL5A2P05997 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 TPM1-218ENST00000559281 851 ntTSL 5 BASIC24.98■■□□□ 1.59
COL5A2P05997 AP005901.3-202ENST00000581653 237 ntBASIC24.98■■□□□ 1.59
COL5A2P05997 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC24.98■■□□□ 1.59
COL5A2P05997 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC24.98■■□□□ 1.59
COL5A2P05997 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
COL5A2P05997 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 KRT8P7-201ENST00000533003 1432 ntBASIC24.97■■□□□ 1.59
COL5A2P05997 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC24.97■■□□□ 1.59
COL5A2P05997 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.97■■□□□ 1.59
COL5A2P05997 AP003733.1-201ENST00000491725 852 ntBASIC24.97■■□□□ 1.59
COL5A2P05997 Z69720.1-201ENST00000601483 472 ntBASIC24.97■■□□□ 1.59
COL5A2P05997 NME4-212ENST00000621774 904 ntTSL 3 BASIC24.97■■□□□ 1.59
COL5A2P05997 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
COL5A2P05997 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.97■■□□□ 1.59
COL5A2P05997 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 RCC2P3-201ENST00000418112 1537 ntBASIC24.97■■□□□ 1.59
COL5A2P05997 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.97■■□□□ 1.59
COL5A2P05997 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.97■■□□□ 1.59
COL5A2P05997 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL5A2P05997 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
COL5A2P05997 PMS2P1-201ENST00000431037 1228 ntBASIC24.96■■□□□ 1.59
COL5A2P05997 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC24.96■■□□□ 1.59
COL5A2P05997 FICD-205ENST00000552758 603 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC24.96■■□□□ 1.59
COL5A2P05997 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 AC099778.1-201ENST00000568593 1911 ntBASIC24.96■■□□□ 1.59
COL5A2P05997 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL5A2P05997 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL5A2P05997 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL5A2P05997 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.96■■□□□ 1.59
COL5A2P05997 AC139530.3-201ENST00000620344 690 ntBASIC24.96■■□□□ 1.59
COL5A2P05997 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL5A2P05997 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL5A2P05997 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 AC008556.1-201ENST00000610908 2040 ntBASIC24.95■■□□□ 1.58
COL5A2P05997 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 CDV3-207ENST00000508481 661 ntTSL 3 BASIC24.95■■□□□ 1.58
COL5A2P05997 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
COL5A2P05997 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
COL5A2P05997 IGHV3OR16-7-201ENST00000604106 360 ntBASIC24.95■■□□□ 1.58
COL5A2P05997 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL5A2P05997 GABARAPL3-202ENST00000624044 1851 ntBASIC24.95■■□□□ 1.58
COL5A2P05997 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC24.94■■□□□ 1.58
COL5A2P05997 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
COL5A2P05997 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL5A2P05997 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL5A2P05997 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC24.94■■□□□ 1.58
COL5A2P05997 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL5A2P05997 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC24.94■■□□□ 1.58
COL5A2P05997 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC24.94■■□□□ 1.58
COL5A2P05997 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC24.94■■□□□ 1.58
COL5A2P05997 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL5A2P05997 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL5A2P05997 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms