Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 UPK3BP1-201ENST00000428678 509 ntBASIC21.3■■□□□ 1
GGPS1O95749 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.3■■□□□ 1
GGPS1O95749 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.3■■□□□ 1
GGPS1O95749 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.3■■□□□ 1
GGPS1O95749 AL121956.5-201ENST00000625261 221 ntBASIC21.3■■□□□ 1
GGPS1O95749 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.3■■□□□ 1
GGPS1O95749 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
GGPS1O95749 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.29■■□□□ 1
GGPS1O95749 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.29■■□□□ 1
GGPS1O95749 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.29■■□□□ 1
GGPS1O95749 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.29■■□□□ 1
GGPS1O95749 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.29■■□□□ 1
GGPS1O95749 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.29■■□□□ 1
GGPS1O95749 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.29■■□□□ 1
GGPS1O95749 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.29■■□□□ 1
GGPS1O95749 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.29■■□□□ 1
GGPS1O95749 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
GGPS1O95749 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
GGPS1O95749 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
GGPS1O95749 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.28■■□□□ 1
GGPS1O95749 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 FAM86EP-206ENST00000510506 987 ntBASIC21.28■■□□□ 1
GGPS1O95749 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.28■■□□□ 1
GGPS1O95749 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
GGPS1O95749 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.28■■□□□ 1
GGPS1O95749 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.28■■□□□ 1
GGPS1O95749 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.28■■□□□ 1
GGPS1O95749 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.28■■□□□ 1
GGPS1O95749 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC21.27■■□□□ 1
GGPS1O95749 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.27■■□□□ 1
GGPS1O95749 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.27■■□□□ 1
GGPS1O95749 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GGPS1O95749 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.27■■□□□ 1
GGPS1O95749 AL023284.2-201ENST00000405850 579 ntBASIC21.27■■□□□ 1
GGPS1O95749 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.27■■□□□ 1
GGPS1O95749 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GGPS1O95749 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.27■■□□□ 1
GGPS1O95749 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.27■■□□□ 1
GGPS1O95749 AP000550.4-202ENST00000639755 178 ntBASIC21.27■■□□□ 1
GGPS1O95749 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
GGPS1O95749 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
GGPS1O95749 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.27■□□□□ 0.99
GGPS1O95749 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.27■□□□□ 0.99
GGPS1O95749 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.27■□□□□ 0.99
GGPS1O95749 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.26■□□□□ 0.99
GGPS1O95749 PCED1CP-201ENST00000419887 785 ntBASIC21.26■□□□□ 0.99
GGPS1O95749 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.26■□□□□ 0.99
GGPS1O95749 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
GGPS1O95749 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.26■□□□□ 0.99
GGPS1O95749 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GGPS1O95749 TEX21P-204ENST00000641479 1693 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms