Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLPXO76031 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.21■□□□□ 0.35
CLPXO76031 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.21■□□□□ 0.35
CLPXO76031 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.21■□□□□ 0.35
CLPXO76031 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.21■□□□□ 0.35
CLPXO76031 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.21■□□□□ 0.35
CLPXO76031 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLPXO76031 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.21■□□□□ 0.35
CLPXO76031 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLPXO76031 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLPXO76031 KRT16P2-201ENST00000414673 1423 ntBASIC17.21■□□□□ 0.34
CLPXO76031 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CLPXO76031 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLPXO76031 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLPXO76031 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.2■□□□□ 0.34
CLPXO76031 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLPXO76031 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 KRT18P20-201ENST00000548986 1279 ntBASIC17.2■□□□□ 0.34
CLPXO76031 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLPXO76031 RAP2CP1-201ENST00000605103 478 ntBASIC17.2■□□□□ 0.34
CLPXO76031 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 AC012317.2-201ENST00000623305 2251 ntBASIC17.2■□□□□ 0.34
CLPXO76031 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLPXO76031 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.2■□□□□ 0.34
CLPXO76031 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLPXO76031 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPXO76031 AL162741.1-201ENST00000565563 1558 ntBASIC17.19■□□□□ 0.34
CLPXO76031 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLPXO76031 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLPXO76031 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.19■□□□□ 0.34
CLPXO76031 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC17.19■□□□□ 0.34
CLPXO76031 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CLPXO76031 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLPXO76031 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLPXO76031 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.18■□□□□ 0.34
CLPXO76031 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLPXO76031 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 CDCA4P2-201ENST00000441182 718 ntBASIC17.18■□□□□ 0.34
CLPXO76031 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 AC073111.5-205ENST00000641717 521 ntBASIC17.18■□□□□ 0.34
CLPXO76031 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLPXO76031 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.18■□□□□ 0.34
CLPXO76031 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms