Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.54■□□□□ 0.72
TSPAN3O60637 AL590326.2-201ENST00000625139 305 ntBASIC19.54■□□□□ 0.72
TSPAN3O60637 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TSPAN3O60637 AC141257.4-201ENST00000634557 245 ntBASIC19.54■□□□□ 0.72
TSPAN3O60637 AC136944.6-201ENST00000634818 245 ntBASIC19.54■□□□□ 0.72
TSPAN3O60637 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.54■□□□□ 0.72
TSPAN3O60637 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
TSPAN3O60637 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.53■□□□□ 0.72
TSPAN3O60637 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TSPAN3O60637 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 AL032819.2-201ENST00000624543 2162 ntBASIC19.53■□□□□ 0.72
TSPAN3O60637 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.53■□□□□ 0.72
TSPAN3O60637 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.53■□□□□ 0.72
TSPAN3O60637 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TSPAN3O60637 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.53■□□□□ 0.72
TSPAN3O60637 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.53■□□□□ 0.72
TSPAN3O60637 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.53■□□□□ 0.72
TSPAN3O60637 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TSPAN3O60637 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.52■□□□□ 0.72
TSPAN3O60637 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.52■□□□□ 0.72
TSPAN3O60637 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
TSPAN3O60637 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
TSPAN3O60637 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 AK4P3-201ENST00000418260 669 ntBASIC19.52■□□□□ 0.72
TSPAN3O60637 AC117947.1-201ENST00000427448 529 ntBASIC19.52■□□□□ 0.72
TSPAN3O60637 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.52■□□□□ 0.72
TSPAN3O60637 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.52■□□□□ 0.72
TSPAN3O60637 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.52■□□□□ 0.72
TSPAN3O60637 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.52■□□□□ 0.72
TSPAN3O60637 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TSPAN3O60637 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.52■□□□□ 0.72
TSPAN3O60637 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
TSPAN3O60637 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TSPAN3O60637 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TSPAN3O60637 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.51■□□□□ 0.71
TSPAN3O60637 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 ARMC10P1-201ENST00000313754 855 ntBASIC19.51■□□□□ 0.71
TSPAN3O60637 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TSPAN3O60637 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.51■□□□□ 0.71
TSPAN3O60637 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
TSPAN3O60637 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.51■□□□□ 0.71
TSPAN3O60637 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
TSPAN3O60637 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
TSPAN3O60637 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TSPAN3O60637 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.5■□□□□ 0.71
TSPAN3O60637 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.5■□□□□ 0.71
TSPAN3O60637 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TSPAN3O60637 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.5■□□□□ 0.71
TSPAN3O60637 WWOX-216ENST00000569818 525 ntBASIC19.5■□□□□ 0.71
TSPAN3O60637 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms