Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.55■■□□□ 1.04
CCNT1O60563 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCNT1O60563 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCNT1O60563 KRT8P9-201ENST00000558927 1449 ntBASIC21.55■■□□□ 1.04
CCNT1O60563 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNT1O60563 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.54■■□□□ 1.04
CCNT1O60563 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.54■■□□□ 1.04
CCNT1O60563 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNT1O60563 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CCNT1O60563 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.54■■□□□ 1.04
CCNT1O60563 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CCNT1O60563 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNT1O60563 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
CCNT1O60563 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CCNT1O60563 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNT1O60563 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.53■■□□□ 1.04
CCNT1O60563 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNT1O60563 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.53■■□□□ 1.04
CCNT1O60563 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
CCNT1O60563 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CCNT1O60563 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.53■■□□□ 1.04
CCNT1O60563 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.53■■□□□ 1.04
CCNT1O60563 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CCNT1O60563 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CCNT1O60563 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CCNT1O60563 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNT1O60563 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNT1O60563 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.52■■□□□ 1.04
CCNT1O60563 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNT1O60563 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
CCNT1O60563 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.52■■□□□ 1.04
CCNT1O60563 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CCNT1O60563 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.52■■□□□ 1.04
CCNT1O60563 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CCNT1O60563 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
CCNT1O60563 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCNT1O60563 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CCNT1O60563 CYP2D8P-201ENST00000433633 1490 ntBASIC21.52■■□□□ 1.03
CCNT1O60563 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CCNT1O60563 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNT1O60563 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CCNT1O60563 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNT1O60563 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.51■■□□□ 1.03
CCNT1O60563 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNT1O60563 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CCNT1O60563 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CCNT1O60563 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNT1O60563 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.51■■□□□ 1.03
CCNT1O60563 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms