Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LCMT2O60294 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LCMT2O60294 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LCMT2O60294 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.14■□□□□ 0.5
LCMT2O60294 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LCMT2O60294 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
LCMT2O60294 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.14■□□□□ 0.49
LCMT2O60294 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.14■□□□□ 0.49
LCMT2O60294 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.14■□□□□ 0.49
LCMT2O60294 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.14■□□□□ 0.49
LCMT2O60294 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.14■□□□□ 0.49
LCMT2O60294 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.14■□□□□ 0.49
LCMT2O60294 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.14■□□□□ 0.49
LCMT2O60294 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.14■□□□□ 0.49
LCMT2O60294 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 AC006333.2-201ENST00000607957 2099 ntBASIC18.14■□□□□ 0.49
LCMT2O60294 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LCMT2O60294 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LCMT2O60294 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LCMT2O60294 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.13■□□□□ 0.49
LCMT2O60294 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.13■□□□□ 0.49
LCMT2O60294 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
LCMT2O60294 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
LCMT2O60294 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
LCMT2O60294 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LCMT2O60294 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.13■□□□□ 0.49
LCMT2O60294 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LCMT2O60294 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.13■□□□□ 0.49
LCMT2O60294 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.12■□□□□ 0.49
LCMT2O60294 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.12■□□□□ 0.49
LCMT2O60294 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.12■□□□□ 0.49
LCMT2O60294 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.12■□□□□ 0.49
LCMT2O60294 AC010947.1-201ENST00000623454 693 ntBASIC18.12■□□□□ 0.49
LCMT2O60294 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.12■□□□□ 0.49
LCMT2O60294 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LCMT2O60294 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LCMT2O60294 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 BX323043.1-201ENST00000641006 1765 ntBASIC18.12■□□□□ 0.49
LCMT2O60294 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LCMT2O60294 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.11■□□□□ 0.49
LCMT2O60294 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LCMT2O60294 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms