Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AL031598.1-201ENST00000561511 1773 ntBASIC18.98■□□□□ 0.63
LDB2O43679 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LDB2O43679 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
LDB2O43679 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LDB2O43679 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LDB2O43679 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.97■□□□□ 0.63
LDB2O43679 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 AP003071.4-201ENST00000562276 1284 ntBASIC18.97■□□□□ 0.63
LDB2O43679 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.97■□□□□ 0.63
LDB2O43679 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.97■□□□□ 0.63
LDB2O43679 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 KRT8P3-201ENST00000519669 1449 ntBASIC18.97■□□□□ 0.63
LDB2O43679 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
LDB2O43679 AL512353.2-201ENST00000448759 1962 ntBASIC18.97■□□□□ 0.63
LDB2O43679 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
LDB2O43679 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LDB2O43679 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.96■□□□□ 0.63
LDB2O43679 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.96■□□□□ 0.63
LDB2O43679 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
LDB2O43679 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.96■□□□□ 0.63
LDB2O43679 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.96■□□□□ 0.63
LDB2O43679 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.96■□□□□ 0.63
LDB2O43679 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.96■□□□□ 0.63
LDB2O43679 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.96■□□□□ 0.63
LDB2O43679 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.96■□□□□ 0.63
LDB2O43679 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
LDB2O43679 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LDB2O43679 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LDB2O43679 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
LDB2O43679 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.95■□□□□ 0.62
LDB2O43679 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.95■□□□□ 0.62
LDB2O43679 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
LDB2O43679 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.95■□□□□ 0.62
LDB2O43679 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.95■□□□□ 0.62
LDB2O43679 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.95■□□□□ 0.62
LDB2O43679 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LDB2O43679 AL138781.2-201ENST00000617896 1843 ntBASIC18.95■□□□□ 0.62
LDB2O43679 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.95■□□□□ 0.62
LDB2O43679 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
LDB2O43679 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB2O43679 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
LDB2O43679 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LDB2O43679 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
LDB2O43679 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.94■□□□□ 0.62
LDB2O43679 AC097488.1-201ENST00000507834 756 ntBASIC18.94■□□□□ 0.62
LDB2O43679 SLC25A1P4-201ENST00000567977 778 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms