Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL161938.1-201ENST00000569833 2180 ntBASIC19.7■□□□□ 0.74
MSI1O43347 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSI1O43347 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
MSI1O43347 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
MSI1O43347 HMGA1P5-201ENST00000412453 271 ntBASIC19.69■□□□□ 0.74
MSI1O43347 AL137013.1-201ENST00000432946 1228 ntBASIC19.69■□□□□ 0.74
MSI1O43347 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.69■□□□□ 0.74
MSI1O43347 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.69■□□□□ 0.74
MSI1O43347 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.69■□□□□ 0.74
MSI1O43347 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
MSI1O43347 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.69■□□□□ 0.74
MSI1O43347 AC010653.2-201ENST00000623505 997 ntBASIC19.69■□□□□ 0.74
MSI1O43347 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
MSI1O43347 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.69■□□□□ 0.74
MSI1O43347 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.69■□□□□ 0.74
MSI1O43347 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSI1O43347 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.68■□□□□ 0.74
MSI1O43347 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MSI1O43347 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.68■□□□□ 0.74
MSI1O43347 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.68■□□□□ 0.74
MSI1O43347 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.68■□□□□ 0.74
MSI1O43347 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
MSI1O43347 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
MSI1O43347 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
MSI1O43347 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.68■□□□□ 0.74
MSI1O43347 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 AC073508.3-201ENST00000619697 1419 ntBASIC19.68■□□□□ 0.74
MSI1O43347 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
MSI1O43347 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MSI1O43347 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.67■□□□□ 0.74
MSI1O43347 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.67■□□□□ 0.74
MSI1O43347 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.67■□□□□ 0.74
MSI1O43347 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.67■□□□□ 0.74
MSI1O43347 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.67■□□□□ 0.74
MSI1O43347 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
MSI1O43347 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MSI1O43347 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.66■□□□□ 0.74
MSI1O43347 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
MSI1O43347 GPAT2P1-201ENST00000444924 1672 ntBASIC19.66■□□□□ 0.74
MSI1O43347 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MSI1O43347 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.66■□□□□ 0.74
MSI1O43347 TMPOP1-202ENST00000424642 1267 ntBASIC19.66■□□□□ 0.74
MSI1O43347 LIN28AP1-201ENST00000429574 405 ntBASIC19.66■□□□□ 0.74
MSI1O43347 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.66■□□□□ 0.74
MSI1O43347 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.66■□□□□ 0.74
MSI1O43347 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.66■□□□□ 0.74
MSI1O43347 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
MSI1O43347 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.66■□□□□ 0.74
MSI1O43347 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.66■□□□□ 0.74
MSI1O43347 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms