Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
ATP2A1O14983 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
ATP2A1O14983 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 SPDYE13P-201ENST00000445314 798 ntBASIC21.72■■□□□ 1.07
ATP2A1O14983 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A1O14983 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A1O14983 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A1O14983 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP2A1O14983 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
ATP2A1O14983 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP2A1O14983 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A1O14983 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A1O14983 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
ATP2A1O14983 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP2A1O14983 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.71■■□□□ 1.07
ATP2A1O14983 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP2A1O14983 MIR3180-5-201ENST00000583743 153 ntBASIC21.71■■□□□ 1.07
ATP2A1O14983 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP2A1O14983 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.71■■□□□ 1.07
ATP2A1O14983 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
ATP2A1O14983 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 SLC25A24-204ENST00000569674 2357 ntBASIC21.71■■□□□ 1.07
ATP2A1O14983 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
ATP2A1O14983 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A1O14983 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A1O14983 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A1O14983 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
ATP2A1O14983 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
ATP2A1O14983 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A1O14983 HBZP1-201ENST00000354915 429 ntBASIC21.7■■□□□ 1.06
ATP2A1O14983 MCCD1P1-208ENST00000445732 328 ntBASIC21.7■■□□□ 1.06
ATP2A1O14983 RASA4DP-201ENST00000460726 1199 ntBASIC21.7■■□□□ 1.06
ATP2A1O14983 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A1O14983 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A1O14983 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP2A1O14983 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A1O14983 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
ATP2A1O14983 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 AC034232.1-201ENST00000506026 1064 ntBASIC21.69■■□□□ 1.06
ATP2A1O14983 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP2A1O14983 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP2A1O14983 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A1O14983 AC036111.1-201ENST00000533973 1582 ntBASIC21.69■■□□□ 1.06
ATP2A1O14983 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP2A1O14983 TEX21P-204ENST00000641479 1693 ntBASIC21.69■■□□□ 1.06
ATP2A1O14983 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
ATP2A1O14983 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
ATP2A1O14983 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A1O14983 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A1O14983 KRT18P56-201ENST00000507275 550 ntBASIC21.68■■□□□ 1.06
ATP2A1O14983 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.68■■□□□ 1.06
ATP2A1O14983 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.68■■□□□ 1.06
ATP2A1O14983 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.68■■□□□ 1.06
ATP2A1O14983 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms