Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC32.46■■■□□ 2.79
CUX2O14529 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 PNMT-202ENST00000394246 821 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC32.46■■■□□ 2.79
CUX2O14529 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC32.46■■■□□ 2.79
CUX2O14529 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC32.46■■■□□ 2.79
CUX2O14529 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC32.46■■■□□ 2.79
CUX2O14529 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC32.46■■■□□ 2.79
CUX2O14529 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC32.46■■■□□ 2.79
CUX2O14529 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
CUX2O14529 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC32.45■■■□□ 2.79
CUX2O14529 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC32.45■■■□□ 2.79
CUX2O14529 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC32.45■■■□□ 2.79
CUX2O14529 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC32.45■■■□□ 2.79
CUX2O14529 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC32.45■■■□□ 2.79
CUX2O14529 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC32.45■■■□□ 2.79
CUX2O14529 AC036111.1-201ENST00000533973 1582 ntBASIC32.45■■■□□ 2.78
CUX2O14529 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CUX2O14529 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC32.45■■■□□ 2.78
CUX2O14529 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CUX2O14529 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
CUX2O14529 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC32.44■■■□□ 2.78
CUX2O14529 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC32.44■■■□□ 2.78
CUX2O14529 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
CUX2O14529 DDT-203ENST00000403754 569 ntTSL 3 BASIC32.44■■■□□ 2.78
CUX2O14529 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC32.44■■■□□ 2.78
CUX2O14529 SYS1-203ENST00000414310 795 ntTSL 3 BASIC32.44■■■□□ 2.78
CUX2O14529 AC211486.1-202ENST00000416371 468 ntBASIC32.44■■■□□ 2.78
CUX2O14529 AC211476.1-201ENST00000503899 468 ntBASIC32.44■■■□□ 2.78
CUX2O14529 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC32.44■■■□□ 2.78
CUX2O14529 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC32.44■■■□□ 2.78
CUX2O14529 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC32.44■■■□□ 2.78
CUX2O14529 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CUX2O14529 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC32.44■■■□□ 2.78
CUX2O14529 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
CUX2O14529 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
CUX2O14529 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC32.44■■■□□ 2.78
CUX2O14529 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC32.43■■■□□ 2.78
CUX2O14529 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC32.43■■■□□ 2.78
CUX2O14529 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC32.43■■■□□ 2.78
CUX2O14529 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CUX2O14529 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CUX2O14529 MIR770-201ENST00000390219 98 ntBASIC32.43■■■□□ 2.78
CUX2O14529 HIST2H3DP1-201ENST00000401004 416 ntBASIC32.43■■■□□ 2.78
CUX2O14529 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC32.43■■■□□ 2.78
CUX2O14529 AC005332.3-201ENST00000589904 676 ntBASIC32.43■■■□□ 2.78
CUX2O14529 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
CUX2O14529 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC32.43■■■□□ 2.78
CUX2O14529 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
CUX2O14529 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC32.42■■■□□ 2.78
CUX2O14529 PNKD-204ENST00000436005 978 ntTSL 5 BASIC32.42■■■□□ 2.78
CUX2O14529 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC32.42■■■□□ 2.78
CUX2O14529 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC32.42■■■□□ 2.78
CUX2O14529 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
CUX2O14529 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC32.42■■■□□ 2.78
CUX2O14529 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC32.42■■■□□ 2.78
CUX2O14529 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC32.42■■■□□ 2.78
CUX2O14529 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC32.42■■■□□ 2.78
CUX2O14529 AC002347.1-201ENST00000569543 541 ntBASIC32.42■■■□□ 2.78
CUX2O14529 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC32.42■■■□□ 2.78
CUX2O14529 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC32.42■■■□□ 2.78
CUX2O14529 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC32.41■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms