Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.1■□□□□ 0.49
RTCAO00442 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 FSCN1P1-201ENST00000568912 1481 ntBASIC18.1■□□□□ 0.49
RTCAO00442 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 MIR718-201ENST00000390190 70 ntBASIC18.1■□□□□ 0.49
RTCAO00442 AC026471.5-201ENST00000615068 467 ntBASIC18.1■□□□□ 0.49
RTCAO00442 REXO1L10P-201ENST00000615707 1290 ntBASIC18.1■□□□□ 0.49
RTCAO00442 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.1■□□□□ 0.49
RTCAO00442 REXO1L12P-201ENST00000622156 912 ntBASIC18.1■□□□□ 0.49
RTCAO00442 AP006294.2-201ENST00000641667 209 ntBASIC18.1■□□□□ 0.49
RTCAO00442 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RTCAO00442 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
RTCAO00442 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RTCAO00442 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 AC020763.4-201ENST00000623414 4170 ntBASIC18.09■□□□□ 0.49
RTCAO00442 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RTCAO00442 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 AL355355.2-201ENST00000442321 338 ntBASIC18.09■□□□□ 0.49
RTCAO00442 SNORA78-201ENST00000459373 127 ntBASIC18.09■□□□□ 0.49
RTCAO00442 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.09■□□□□ 0.49
RTCAO00442 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.09■□□□□ 0.49
RTCAO00442 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RTCAO00442 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RTCAO00442 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.09■□□□□ 0.49
RTCAO00442 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RTCAO00442 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.08■□□□□ 0.49
RTCAO00442 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RTCAO00442 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.08■□□□□ 0.49
RTCAO00442 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RTCAO00442 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 AL020996.1-203ENST00000536896 2307 ntBASIC18.08■□□□□ 0.48
RTCAO00442 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.08■□□□□ 0.48
RTCAO00442 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 AC116562.2-201ENST00000507042 360 ntBASIC18.08■□□□□ 0.48
RTCAO00442 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.08■□□□□ 0.48
RTCAO00442 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.08■□□□□ 0.48
RTCAO00442 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.08■□□□□ 0.48
RTCAO00442 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RTCAO00442 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RTCAO00442 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.07■□□□□ 0.48
RTCAO00442 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
RTCAO00442 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 RNF165-205ENST00000588679 2904 ntBASIC18.07■□□□□ 0.48
RTCAO00442 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.07■□□□□ 0.48
RTCAO00442 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RTCAO00442 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RTCAO00442 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.07■□□□□ 0.48
RTCAO00442 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms