Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TNFRSF11BO00300 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 TUBB8P6-201ENST00000436895 1288 ntBASIC17.55■□□□□ 0.4
TNFRSF11BO00300 KRT18P16-201ENST00000510337 1294 ntBASIC17.55■□□□□ 0.4
TNFRSF11BO00300 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
TNFRSF11BO00300 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 ABALON-201ENST00000629058 1903 ntBASIC17.54■□□□□ 0.4
TNFRSF11BO00300 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AC068880.1-201ENST00000507289 2297 ntBASIC17.54■□□□□ 0.4
TNFRSF11BO00300 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF11BO00300 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF11BO00300 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms