Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AC132008.2-207ENST00000454517 770 ntBASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AC011840.4-201ENST00000578471 627 ntBASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 AC010240.3-201ENST00000607688 395 ntBASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TMEM88BA6NKF7 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 IGHV3-22-201ENST00000520721 359 ntBASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC22.06■■□□□ 1.12
TMEM88BA6NKF7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 BNIP3P18-201ENST00000593976 575 ntBASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
TMEM88BA6NKF7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 SART3-203ENST00000546611 1184 ntBASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 AC104390.1-201ENST00000555663 520 ntBASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 AC006128.1-201ENST00000624704 1661 ntBASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TMEM88BA6NKF7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 DNAJB3-202ENST00000449667 1266 ntBASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC22.03■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms