Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 KRT8P3-201ENST00000519669 1449 ntBASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.08■■□□□ 1.13
CCDC196A0A1B0GTZ2 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CCDC196A0A1B0GTZ2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 CRYGFP-201ENST00000418459 633 ntBASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC22.07■■□□□ 1.12
CCDC196A0A1B0GTZ2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC098818.2-201ENST00000564925 2320 ntBASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 CA15P1-201ENST00000481698 905 ntBASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC006333.2-201ENST00000607957 2099 ntBASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 AL355075.4-201ENST00000554988 638 ntBASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CCDC196A0A1B0GTZ2 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms