Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 AL121912.1-201ENST00000603683 238 ntBASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 HOXB1-202ENST00000577092 1414 ntBASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.77■□□□□ 0.6
CCDC163A0A0D9SF12 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC163A0A0D9SF12 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC163A0A0D9SF12 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CCDC163A0A0D9SF12 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.77■□□□□ 0.59
CCDC163A0A0D9SF12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 AC117500.6-201ENST00000624871 588 ntBASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCDC163A0A0D9SF12 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 Z83836.1-201ENST00000624605 1642 ntBASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 AC104390.1-201ENST00000555663 520 ntBASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 AL353801.3-201ENST00000609898 542 ntBASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 AL109659.2-201ENST00000606809 1674 ntBASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCDC163A0A0D9SF12 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 AP000593.1-201ENST00000393668 712 ntBASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 Z69720.1-201ENST00000601483 472 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms