Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC009318.2-201ENST00000610917 651 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 AC098657.3-201ENST00000620434 263 ntBASIC2.8□□□□□ -1.96
LRFN1Q9P244 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
LRFN1Q9P244 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
LRFN1Q9P244 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN1Q9P244 snoU2_19.1-201ENST00000362361 80 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNU4-15P-201ENST00000362613 141 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNU4-56P-201ENST00000364700 142 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 SNORA51.4-201ENST00000364993 124 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNU6-301P-201ENST00000384277 107 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNA5SP344-201ENST00000411081 104 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RPL32P35-201ENST00000415214 394 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 AL513124.1-201ENST00000450410 614 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 SNORD19B-201ENST00000459623 84 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNA5SP217-201ENST00000515959 91 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RNU6-1153P-201ENST00000516760 105 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 Y_RNA.701-201ENST00000516812 110 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC104027.1-201ENST00000521887 300 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 MIR4273-201ENST00000582824 84 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 MIR4672-201ENST00000583126 81 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC078899.3-201ENST00000599065 212 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 RPL12P50-201ENST00000603116 116 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 Z98751.3-201ENST00000604447 521 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 PISRT1.1-201ENST00000616930 107 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 MTND4LP32-201ENST00000636111 270 ntBASIC2.79□□□□□ -1.96
LRFN1Q9P244 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.79□□□□□ -1.96
LRFN1Q9P244 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
LRFN1Q9P244 AC069528.2-201ENST00000624849 1991 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRFN1Q9P244 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU5B-2P-201ENST00000363036 113 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 Y_RNA.259-201ENST00000364619 101 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU1-109P-201ENST00000383960 147 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-968P-201ENST00000384076 107 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-1032P-201ENST00000384100 107 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 SNORA29-201ENST00000384183 140 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 SNORA36A-201ENST00000384221 132 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-1274P-201ENST00000384557 107 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-1072P-201ENST00000384703 107 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-443P-201ENST00000384780 107 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 MTCYBP2-201ENST00000407745 171 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNA5SP201-201ENST00000410316 124 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU6-1304P-201ENST00000411374 106 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 EEF1A1P41-201ENST00000414667 207 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC244505.4-201ENST00000434905 287 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC236972.2-201ENST00000434979 310 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 RPL21P2-201ENST00000440049 481 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 SSXP5-201ENST00000443473 287 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 RNU7-26P-201ENST00000458980 63 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 Y_RNA.708-201ENST00000516950 96 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC018630.3-201ENST00000542637 96 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 CYP4A27P-201ENST00000567218 190 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 AC011494.1-201ENST00000596454 237 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 AL133255.1-201ENST00000606374 441 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 U4atac.1-201ENST00000618345 95 ntBASIC2.78□□□□□ -1.96
LRFN1Q9P244 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRFN1Q9P244 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LRFN1Q9P244 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
LRFN1Q9P244 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
LRFN1Q9P244 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
LRFN1Q9P244 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.77□□□□□ -1.97
LRFN1Q9P244 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LRFN1Q9P244 RNU6-1059P-201ENST00000363752 98 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 RNU6-842P-201ENST00000384269 107 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 RNU6-1297P-201ENST00000384415 104 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 SNORD116-29-201ENST00000384516 83 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 RNU6-1011P-201ENST00000384668 107 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 Y_RNA.594-201ENST00000410373 140 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 HMGB3P2-201ENST00000411913 584 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.77□□□□□ -1.97
LRFN1Q9P244 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.77□□□□□ -1.97
LRFN1Q9P244 CKS1BP2-201ENST00000497342 240 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.77□□□□□ -1.97
LRFN1Q9P244 Y_RNA.718-201ENST00000517110 102 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 SCARNA20.6-201ENST00000517251 106 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 APOOP3-201ENST00000536787 586 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 AC109446.1-201ENST00000566172 220 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 MIR5696-201ENST00000578474 85 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 MIR3923-201ENST00000579521 83 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.77□□□□□ -1.97
LRFN1Q9P244 AC005520.5-201ENST00000613926 164 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 AL160413.1-201ENST00000622780 310 ntBASIC2.77□□□□□ -1.97
LRFN1Q9P244 AC090517.3-201ENST00000625170 141 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms