Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 RNU6-937P-201ENST00000384325 106 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.562-201ENST00000384695 113 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 RNU6-159P-201ENST00000391080 106 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 SNORD12B-201ENST00000410433 91 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC012306.1-201ENST00000423267 114 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC004383.1-201ENST00000438135 289 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 MTND4LP30-201ENST00000454092 297 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC090525.1-201ENST00000479116 478 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 SNORA31.1-201ENST00000515993 133 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 SNORA31.5-201ENST00000516190 133 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.673-201ENST00000516306 88 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 RNU5B-3P-201ENST00000516601 115 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 MIR4474-201ENST00000579189 78 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AP001282.2-201ENST00000616149 309 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.29□□□□□ -1.88
KCMF1Q9P0J7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AL079305.1-201ENST00000623159 3008 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORD46.1-201ENST00000364139 104 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORA20.1-201ENST00000364790 130 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.552-201ENST00000384665 112 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 U3.19-201ENST00000390893 196 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORD17-201ENST00000390930 237 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORA26.3-201ENST00000391119 136 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.602-201ENST00000410535 92 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 RN7SKP58-201ENST00000411010 305 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1001P-201ENST00000411265 100 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AL357552.1-201ENST00000445254 415 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AL441985.1-201ENST00000457727 251 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORA31.21-201ENST00000517180 77 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AC115990.1-201ENST00000526957 301 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 RPS15AP11-201ENST00000594193 385 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 AC073657.2-201ENST00000605661 303 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SNORD98-201ENST00000636377 67 ntBASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KCMF1Q9P0J7 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNA5SP50-201ENST00000363731 107 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.237-201ENST00000364439 102 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNU6-281P-201ENST00000384212 103 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 Y_RNA.518-201ENST00000384552 113 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 MIR183-201ENST00000384958 110 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNU6-750P-201ENST00000390946 107 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 AL358075.3-201ENST00000426289 226 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1023P-201ENST00000516137 106 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 RNU6-1198P-201ENST00000516904 67 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 DEFB108E-201ENST00000524692 240 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 AL137843.1-201ENST00000605078 385 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 AL442067.1-201ENST00000613261 223 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
KCMF1Q9P0J7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 MIR208A-201ENST00000362287 71 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 SNORD113-8-201ENST00000363497 74 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AP002088.1-201ENST00000382740 395 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 AC096649.2-201ENST00000416186 393 ntBASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.26□□□□□ -1.89
KCMF1Q9P0J7 Z98949.2-201ENST00000440996 144 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms