Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 AC112191.3-201ENST00000604371 277 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 AL078595.3-201ENST00000623815 1166 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.1□□□□□ -2.23
VAT1Q99536 AC100821.1-201ENST00000523153 2479 ntBASIC1.1□□□□□ -2.23
VAT1Q99536 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.09□□□□□ -2.23
VAT1Q99536 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.09□□□□□ -2.23
VAT1Q99536 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 RNU6-1141P-201ENST00000364520 107 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AL590135.1-201ENST00000422215 156 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC019205.3-201ENST00000424573 156 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC099677.2-201ENST00000436385 175 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC016700.2-201ENST00000446011 156 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 USP9YP12-201ENST00000450481 570 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.09□□□□□ -2.23
VAT1Q99536 RPL9P9-202ENST00000466501 579 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC015911.1-201ENST00000495111 156 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.09□□□□□ -2.23
VAT1Q99536 AC104136.1-201ENST00000512969 394 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 RNA5SP437-201ENST00000517249 129 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 SUMO2P18-201ENST00000518873 252 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 ELOCP32-201ENST00000548625 324 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 RPL21P5-201ENST00000554662 472 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.09□□□□□ -2.23
VAT1Q99536 MIR4295-201ENST00000585286 85 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC090578.1-201ENST00000604955 591 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 snoU13.31-201ENST00000607291 104 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 AC091304.9-201ENST00000612091 226 ntBASIC1.09□□□□□ -2.23
VAT1Q99536 RNU6-438P-201ENST00000365561 103 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 SNORA32.2-201ENST00000384049 122 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 MIR520A-201ENST00000384862 85 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 MIR548B-201ENST00000385247 97 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 RNA5SP201-201ENST00000410316 124 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.08□□□□□ -2.24
VAT1Q99536 SNRPEP10-201ENST00000420249 274 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AC245047.4-201ENST00000433189 144 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AC104850.1-201ENST00000435940 476 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 EPS15P1-201ENST00000448836 336 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.08□□□□□ -2.24
VAT1Q99536 GAPDHP17-201ENST00000449858 1001 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 OR2AQ1P-201ENST00000451972 200 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 RNA5SP269-201ENST00000459032 137 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 RAP1BP2-201ENST00000478270 544 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AL163540.1-201ENST00000485382 386 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AC079140.2-201ENST00000506193 142 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 RRN3P3-201ENST00000549207 578 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AC012414.6-201ENST00000568241 401 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AL078604.3-201ENST00000615580 211 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 AC138649.3-201ENST00000622154 254 ntBASIC1.08□□□□□ -2.24
VAT1Q99536 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
VAT1Q99536 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.07□□□□□ -2.24
VAT1Q99536 RNU6-428P-201ENST00000362942 107 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 RNU6-336P-201ENST00000364891 107 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 AC092473.1-201ENST00000441098 221 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.07□□□□□ -2.24
VAT1Q99536 TOMM22P6-201ENST00000465035 409 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.07□□□□□ -2.24
VAT1Q99536 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.07□□□□□ -2.24
VAT1Q99536 AC023050.3-201ENST00000541142 333 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.07□□□□□ -2.24
VAT1Q99536 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.07□□□□□ -2.24
VAT1Q99536 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.07□□□□□ -2.24
VAT1Q99536 BNIP3P16-201ENST00000589779 534 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 AL590229.1-201ENST00000603497 542 ntBASIC1.07□□□□□ -2.24
VAT1Q99536 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.07□□□□□ -2.24
VAT1Q99536 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VAT1Q99536 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VAT1Q99536 AC010615.1-201ENST00000594254 1764 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 U3.4-201ENST00000363352 213 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 RNU6-1303P-201ENST00000364841 107 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 MIR618-201ENST00000385287 98 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 RNU6-550P-201ENST00000391057 101 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 RNU2-8P-201ENST00000410727 190 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 EBAG9P1-201ENST00000418955 543 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.06□□□□□ -2.24
VAT1Q99536 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.06□□□□□ -2.24
VAT1Q99536 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
VAT1Q99536 TOMM22P2-201ENST00000430735 237 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 FTH1P12-201ENST00000432137 551 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 GTF2IP13-201ENST00000438487 386 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.06□□□□□ -2.24
VAT1Q99536 TAF9P1-201ENST00000445421 515 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 TAF9P2-201ENST00000454958 515 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 SNRPFP4-201ENST00000456366 242 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.06□□□□□ -2.24
VAT1Q99536 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.06□□□□□ -2.24
VAT1Q99536 snoU13.30-201ENST00000458951 104 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 RPL30P7-201ENST00000479312 323 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 RNU2-46P-201ENST00000517038 113 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VAT1Q99536 AC019176.1-201ENST00000518519 225 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AC090572.1-201ENST00000519251 160 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.06□□□□□ -2.24
VAT1Q99536 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.06□□□□□ -2.24
VAT1Q99536 ZNF321P-202ENST00000550843 495 ntBASIC1.06□□□□□ -2.24
VAT1Q99536 AC019288.1-201ENST00000557918 224 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms