Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-CQ95604 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HLA-CQ95604 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.63□□□□□ -1.67
HLA-CQ95604 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-CQ95604 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.62□□□□□ -1.67
HLA-CQ95604 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-CQ95604 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-CQ95604 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-CQ95604 RNU6-271P-201ENST00000363858 105 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 MIR634-201ENST00000385208 97 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 MIR1185-2-201ENST00000408687 86 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 RN7SKP177-201ENST00000410567 355 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 AC012671.1-201ENST00000451912 203 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 SNRPGP8-201ENST00000454064 226 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 SNORA59A-201ENST00000459326 152 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-CQ95604 AC015813.4-201ENST00000610469 179 ntBASIC4.62□□□□□ -1.67
HLA-CQ95604 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-CQ95604 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-CQ95604 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HLA-CQ95604 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.62□□□□□ -1.67
HLA-CQ95604 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.61□□□□□ -1.67
HLA-CQ95604 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HLA-CQ95604 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-CQ95604 RNU6-655P-201ENST00000362858 107 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 RNA5SP167-201ENST00000365461 116 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 RNA5SP89-201ENST00000410300 108 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-CQ95604 HMGN2P20-201ENST00000437531 273 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 MIR3200-201ENST00000580767 85 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 AC096577.2-201ENST00000611455 153 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.61□□□□□ -1.67
HLA-CQ95604 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 AC138915.1-201ENST00000565427 1685 ntBASIC4.61□□□□□ -1.67
HLA-CQ95604 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HLA-CQ95604 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.6□□□□□ -1.67
HLA-CQ95604 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
HLA-CQ95604 Y_RNA.111-201ENST00000363248 100 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 RNU6-978P-201ENST00000364371 103 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 UBBP2-201ENST00000376781 231 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 RNU6-136P-201ENST00000384663 107 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-CQ95604 RPL39P40-201ENST00000445481 146 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 RNU6-437P-201ENST00000459408 95 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 RPL23AP62-201ENST00000463396 453 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 RPL32P34-201ENST00000486380 400 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.6□□□□□ -1.67
HLA-CQ95604 AC133485.4-201ENST00000561835 220 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 AC138907.4-201ENST00000570107 226 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 AL592182.3-201ENST00000642132 3304 ntBASIC4.6□□□□□ -1.67
HLA-CQ95604 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.6□□□□□ -1.67
HLA-CQ95604 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-CQ95604 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
HLA-CQ95604 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.59□□□□□ -1.67
HLA-CQ95604 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-CQ95604 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-CQ95604 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-CQ95604 RNU6-647P-201ENST00000364243 107 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 Y_RNA.432-201ENST00000384087 111 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 Y_RNA.622-201ENST00000411091 108 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-CQ95604 Y_RNA.651-201ENST00000459380 103 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AP002884.2-201ENST00000471647 395 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AC110768.1-201ENST00000509222 400 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 RNA5SP497-201ENST00000516081 97 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AP003122.5-201ENST00000527668 3766 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AC131055.1-201ENST00000584626 316 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 AL133243.3-201ENST00000617415 3004 ntBASIC4.59□□□□□ -1.67
HLA-CQ95604 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.67
HLA-CQ95604 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HLA-CQ95604 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.59□□□□□ -1.67
HLA-CQ95604 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-CQ95604 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HLA-CQ95604 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HLA-CQ95604 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-CQ95604 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 ADAM5-202ENST00000399789 1942 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HLA-CQ95604 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.58□□□□□ -1.68
HLA-CQ95604 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 Y_RNA.294-201ENST00000364916 102 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 SNORD116-21-201ENST00000384507 92 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-CQ95604 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.58□□□□□ -1.68
HLA-CQ95604 AC099522.1-202ENST00000514718 367 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 RNU1-61P-201ENST00000516107 151 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 SNORD33.1-201ENST00000516213 88 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.58□□□□□ -1.68
HLA-CQ95604 POLR3GP1-201ENST00000594073 261 ntBASIC4.58□□□□□ -1.68
HLA-CQ95604 AC108081.1-201ENST00000604358 221 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms