Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 RNU6-377P-201ENST00000515965 102 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 RNU2-69P-201ENST00000516061 100 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 RNU6-991P-201ENST00000516168 107 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDH17Q12864 AP002963.1-201ENST00000530590 184 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH17Q12864 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH17Q12864 AC010900.2-201ENST00000604508 210 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 MIR1248-201ENST00000629190 106 ntBASIC1.47□□□□□ -2.17
CDH17Q12864 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.47□□□□□ -2.17
CDH17Q12864 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CDH17Q12864 RNU1-17P-201ENST00000363022 152 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 Y_RNA.164-201ENST00000363709 102 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 RNU1-42P-201ENST00000364033 160 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 RNU6-1127P-201ENST00000384580 107 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 RNU6-606P-201ENST00000384721 111 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 CBX3P6-201ENST00000430257 527 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 MTCO2P11-201ENST00000431069 680 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 AC013470.1-201ENST00000453438 462 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 C1DP4-201ENST00000455429 424 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 GMFBP1-201ENST00000467831 427 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.46□□□□□ -2.18
CDH17Q12864 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH17Q12864 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH17Q12864 AP001893.2-201ENST00000526949 202 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH17Q12864 AC025449.1-201ENST00000603896 529 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 AC136475.10-201ENST00000620253 385 ntBASIC1.46□□□□□ -2.18
CDH17Q12864 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.46□□□□□ -2.18
CDH17Q12864 MIR424-201ENST00000362227 98 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 U8.1-201ENST00000362843 134 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU6-428P-201ENST00000362942 107 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU4-13P-201ENST00000364019 141 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU6-336P-201ENST00000364891 107 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 RNU6-434P-201ENST00000384376 107 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 SNORA48.1-201ENST00000390879 135 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNA5SP213-201ENST00000391031 106 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 SNORA12-201ENST00000391162 147 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU2-9P-201ENST00000410194 145 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RN7SKP142-201ENST00000411236 328 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU6-293P-201ENST00000411259 106 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH17Q12864 PRPS1P1-201ENST00000445305 876 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 MTND1P27-201ENST00000451117 902 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 SNRPGP7-201ENST00000469016 106 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC079382.1-201ENST00000493346 557 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH17Q12864 SNORA25.17-201ENST00000517184 124 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC115990.1-201ENST00000526957 301 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AL356057.1-201ENST00000533798 831 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH17Q12864 MTCO3P23-201ENST00000561363 289 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC015720.1-201ENST00000565251 277 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC008752.3-201ENST00000588113 712 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC023043.2-201ENST00000589678 1026 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC040904.1-201ENST00000590850 223 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.45□□□□□ -2.18
CDH17Q12864 AC018889.1-201ENST00000605372 397 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CDH17Q12864 AC072046.2-201ENST00000618366 268 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 AP000770.2-201ENST00000623694 100 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.45□□□□□ -2.18
CDH17Q12864 AL390237.1-201ENST00000404226 1415 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.45□□□□□ -2.18
CDH17Q12864 RNU6-661P-201ENST00000362409 107 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RNU4-15P-201ENST00000362613 141 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RNU6-348P-201ENST00000384386 107 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RNU6-692P-201ENST00000384496 107 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RNU6-1245P-201ENST00000411130 106 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AL358934.1-201ENST00000432346 324 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH17Q12864 SNRPGP13-201ENST00000442212 177 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AL357134.1-201ENST00000445848 426 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 SCARNA18-201ENST00000459004 134 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RN7SKP210-201ENST00000459176 261 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 BET1P1-201ENST00000482276 359 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AC093259.1-201ENST00000509755 300 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH17Q12864 AC108729.3-201ENST00000513484 108 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.44□□□□□ -2.18
CDH17Q12864 AC105417.1-201ENST00000514691 285 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RNU6-430P-201ENST00000517078 107 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AC109479.2-201ENST00000517842 174 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH17Q12864 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH17Q12864 SUB1P2-201ENST00000556401 297 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 AGGF1P4-201ENST00000568249 801 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 MIR4528-201ENST00000577763 90 ntBASIC1.44□□□□□ -2.18
CDH17Q12864 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.44□□□□□ -2.18
CDH17Q12864 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.44□□□□□ -2.18
CDH17Q12864 AC107304.1-201ENST00000604229 296 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms