Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 AC098679.4-201ENST00000624241 654 ntBASIC1.68□□□□□ -2.14
LHX2P50458 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.68□□□□□ -2.14
LHX2P50458 AC073869.6-201ENST00000640656 341 ntBASIC1.68□□□□□ -2.14
LHX2P50458 AC121333.1-201ENST00000567488 2709 ntBASIC1.68□□□□□ -2.14
LHX2P50458 OR4G1P-203ENST00000641984 1631 ntBASIC1.68□□□□□ -2.14
LHX2P50458 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
LHX2P50458 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.68□□□□□ -2.14
LHX2P50458 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.67□□□□□ -2.14
LHX2P50458 Y_RNA.40-201ENST00000362645 93 ntBASIC1.67□□□□□ -2.14
LHX2P50458 RNU6-451P-201ENST00000362921 107 ntBASIC1.67□□□□□ -2.14
LHX2P50458 RNU6-428P-201ENST00000362942 107 ntBASIC1.67□□□□□ -2.14
LHX2P50458 Y_RNA.231-201ENST00000364358 102 ntBASIC1.67□□□□□ -2.14
LHX2P50458 Y_RNA.450-201ENST00000384198 113 ntBASIC1.67□□□□□ -2.14
LHX2P50458 RNU6-192P-201ENST00000391253 100 ntBASIC1.67□□□□□ -2.14
LHX2P50458 RNU6-293P-201ENST00000411259 106 ntBASIC1.67□□□□□ -2.14
LHX2P50458 CYCSP48-201ENST00000417124 323 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AL117339.3-201ENST00000418733 162 ntBASIC1.67□□□□□ -2.14
LHX2P50458 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.67□□□□□ -2.14
LHX2P50458 USP9YP18-201ENST00000425912 695 ntBASIC1.67□□□□□ -2.14
LHX2P50458 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.67□□□□□ -2.14
LHX2P50458 ERLEC1P1-201ENST00000433806 578 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX2P50458 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX2P50458 snoU13.14-201ENST00000459372 104 ntBASIC1.67□□□□□ -2.14
LHX2P50458 RPL30P12-201ENST00000474666 353 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC140059.1-201ENST00000489238 361 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.67□□□□□ -2.14
LHX2P50458 AC109635.3-201ENST00000529536 185 ntBASIC1.67□□□□□ -2.14
LHX2P50458 PSMA3P-201ENST00000555485 635 ntBASIC1.67□□□□□ -2.14
LHX2P50458 ANP32BP3-201ENST00000559213 706 ntBASIC1.67□□□□□ -2.14
LHX2P50458 VN1R107P-201ENST00000601784 209 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC073410.2-201ENST00000603240 332 ntBASIC1.67□□□□□ -2.14
LHX2P50458 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.67□□□□□ -2.14
LHX2P50458 MIR5739-201ENST00000619803 80 ntBASIC1.67□□□□□ -2.14
LHX2P50458 SDR42E1P4-201ENST00000620894 481 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC007792.1-201ENST00000623023 402 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AC097372.5-201ENST00000623665 376 ntBASIC1.67□□□□□ -2.14
LHX2P50458 AL359757.2-201ENST00000624309 274 ntBASIC1.67□□□□□ -2.14
LHX2P50458 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
LHX2P50458 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LHX2P50458 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LHX2P50458 RNU6-522P-201ENST00000364497 107 ntBASIC1.66□□□□□ -2.14
LHX2P50458 RNA5SP125-201ENST00000364843 120 ntBASIC1.66□□□□□ -2.14
LHX2P50458 RNU6-336P-201ENST00000364891 107 ntBASIC1.66□□□□□ -2.14
LHX2P50458 RNU6-827P-201ENST00000365553 106 ntBASIC1.66□□□□□ -2.14
LHX2P50458 MIR544A-201ENST00000384855 91 ntBASIC1.66□□□□□ -2.14
LHX2P50458 MIR9-3-201ENST00000385084 90 ntBASIC1.66□□□□□ -2.14
LHX2P50458 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LHX2P50458 MIR676-201ENST00000390702 67 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.66□□□□□ -2.14
LHX2P50458 CYCSP49-201ENST00000420810 319 ntBASIC1.66□□□□□ -2.14
LHX2P50458 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX2P50458 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX2P50458 RPL39P29-201ENST00000447779 157 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX2P50458 RNU7-138P-201ENST00000459479 64 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AF213884.2-201ENST00000510417 903 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC107393.1-201ENST00000512403 346 ntBASIC1.66□□□□□ -2.14
LHX2P50458 RNU2-53P-201ENST00000516257 147 ntBASIC1.66□□□□□ -2.14
LHX2P50458 MTND1P5-201ENST00000517906 940 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX2P50458 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.66□□□□□ -2.14
LHX2P50458 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX2P50458 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX2P50458 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
LHX2P50458 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.66□□□□□ -2.14
LHX2P50458 AC103996.1-201ENST00000555468 102 ntBASIC1.66□□□□□ -2.14
LHX2P50458 RPL30P11-203ENST00000598995 310 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC080078.2-201ENST00000603766 501 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AL138963.2-201ENST00000605137 226 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AL121757.2-201ENST00000611223 313 ntBASIC1.66□□□□□ -2.14
LHX2P50458 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC090517.2-201ENST00000614966 680 ntBASIC1.66□□□□□ -2.14
LHX2P50458 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AC091932.3-201ENST00000624223 323 ntBASIC1.66□□□□□ -2.14
LHX2P50458 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX2P50458 AC024614.3-201ENST00000637860 256 ntBASIC1.66□□□□□ -2.14
LHX2P50458 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.66□□□□□ -2.14
LHX2P50458 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LHX2P50458 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LHX2P50458 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LHX2P50458 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.65□□□□□ -2.14
LHX2P50458 RNU4-12P-201ENST00000365233 139 ntBASIC1.65□□□□□ -2.15
LHX2P50458 RNU6-1222P-201ENST00000384615 107 ntBASIC1.65□□□□□ -2.15
LHX2P50458 MIR95-201ENST00000385072 81 ntBASIC1.65□□□□□ -2.15
LHX2P50458 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
LHX2P50458 RNU6-332P-201ENST00000391193 108 ntBASIC1.65□□□□□ -2.15
LHX2P50458 EIF4E2P1-201ENST00000393781 255 ntBASIC1.65□□□□□ -2.15
LHX2P50458 MIR548F1-201ENST00000408667 84 ntBASIC1.65□□□□□ -2.15
LHX2P50458 Y_RNA.615-201ENST00000410769 117 ntBASIC1.65□□□□□ -2.15
LHX2P50458 AIMP1P2-201ENST00000425294 312 ntBASIC1.65□□□□□ -2.15
LHX2P50458 AL161788.1-201ENST00000441805 169 ntBASIC1.65□□□□□ -2.15
LHX2P50458 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.65□□□□□ -2.15
LHX2P50458 AL031274.1-201ENST00000450334 232 ntBASIC1.65□□□□□ -2.15
LHX2P50458 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.65□□□□□ -2.15
LHX2P50458 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.65□□□□□ -2.15
LHX2P50458 AC083904.1-201ENST00000487828 231 ntBASIC1.65□□□□□ -2.15
LHX2P50458 RPL30P1-201ENST00000488676 339 ntBASIC1.65□□□□□ -2.15
LHX2P50458 AC082651.2-201ENST00000496833 166 ntBASIC1.65□□□□□ -2.15
LHX2P50458 RPL23AP63-201ENST00000498752 471 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms