Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 DNAJC19P9-201ENST00000555084 351 ntBASIC1.26□□□□□ -2.21
CD28P10747 AGGF1P4-201ENST00000568249 801 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC103987.3-201ENST00000582071 292 ntBASIC1.26□□□□□ -2.21
CD28P10747 BNIP3P25-201ENST00000596023 559 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL590229.1-201ENST00000603497 542 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL645939.4-201ENST00000604495 135 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC010900.2-201ENST00000604508 210 ntBASIC1.26□□□□□ -2.21
CD28P10747 AL512598.1-201ENST00000610158 273 ntBASIC1.26□□□□□ -2.21
CD28P10747 U1.36-201ENST00000620684 176 ntBASIC1.26□□□□□ -2.21
CD28P10747 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC091931.1-201ENST00000623488 728 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC005609.4-201ENST00000625071 447 ntBASIC1.26□□□□□ -2.21
CD28P10747 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.26□□□□□ -2.21
CD28P10747 RNA5SP363-201ENST00000365072 115 ntBASIC1.25□□□□□ -2.21
CD28P10747 Y_RNA.332-201ENST00000365271 113 ntBASIC1.25□□□□□ -2.21
CD28P10747 RNU6-43P-201ENST00000384302 107 ntBASIC1.25□□□□□ -2.21
CD28P10747 RNU6-456P-201ENST00000384493 107 ntBASIC1.25□□□□□ -2.21
CD28P10747 MIR597-201ENST00000384968 97 ntBASIC1.25□□□□□ -2.21
CD28P10747 SNORA48.1-201ENST00000390879 135 ntBASIC1.25□□□□□ -2.21
CD28P10747 SNORD70.1-201ENST00000391007 85 ntBASIC1.25□□□□□ -2.21
CD28P10747 BTF3L4P2-201ENST00000392798 346 ntBASIC1.25□□□□□ -2.21
CD28P10747 RNA5SP201-201ENST00000410316 124 ntBASIC1.25□□□□□ -2.21
CD28P10747 RNA5SP501-201ENST00000410990 112 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.25□□□□□ -2.21
CD28P10747 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.25□□□□□ -2.21
CD28P10747 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.25□□□□□ -2.21
CD28P10747 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.25□□□□□ -2.21
CD28P10747 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.25□□□□□ -2.21
CD28P10747 MTND4P32-201ENST00000437189 1237 ntBASIC1.25□□□□□ -2.21
CD28P10747 HSPE1P21-201ENST00000438283 308 ntBASIC1.25□□□□□ -2.21
CD28P10747 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.25□□□□□ -2.21
CD28P10747 PRPS1P1-201ENST00000445305 876 ntBASIC1.25□□□□□ -2.21
CD28P10747 AL360221.1-201ENST00000445989 335 ntBASIC1.25□□□□□ -2.21
CD28P10747 RPS27AP8-201ENST00000452665 445 ntBASIC1.25□□□□□ -2.21
CD28P10747 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.25□□□□□ -2.21
CD28P10747 RNU7-95P-201ENST00000459222 64 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC132942.1-201ENST00000486753 483 ntBASIC1.25□□□□□ -2.21
CD28P10747 MTND3P5-201ENST00000512798 333 ntBASIC1.25□□□□□ -2.21
CD28P10747 AL356057.1-201ENST00000533798 831 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC022880.1-201ENST00000534017 973 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.25□□□□□ -2.21
CD28P10747 MIR3913-1-201ENST00000577744 102 ntBASIC1.25□□□□□ -2.21
CD28P10747 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.25□□□□□ -2.21
CD28P10747 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.25□□□□□ -2.21
CD28P10747 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC1.25□□□□□ -2.21
CD28P10747 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.25□□□□□ -2.21
CD28P10747 AC068790.2-201ENST00000602601 557 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC025449.1-201ENST00000603896 529 ntBASIC1.25□□□□□ -2.21
CD28P10747 Z84480.1-201ENST00000605131 311 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC063943.3-201ENST00000615562 356 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC072046.2-201ENST00000618366 268 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC136475.10-201ENST00000620253 385 ntBASIC1.25□□□□□ -2.21
CD28P10747 AC120349.3-201ENST00000624377 529 ntBASIC1.25□□□□□ -2.21
CD28P10747 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CD28P10747 SNORD98-201ENST00000636377 67 ntBASIC1.25□□□□□ -2.21
CD28P10747 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CD28P10747 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
CD28P10747 RNU6-428P-201ENST00000362942 107 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-1120P-201ENST00000362988 108 ntBASIC1.24□□□□□ -2.21
CD28P10747 SNORD115-3-201ENST00000363100 82 ntBASIC1.24□□□□□ -2.21
CD28P10747 Y_RNA.159-201ENST00000363674 87 ntBASIC1.24□□□□□ -2.21
CD28P10747 Y_RNA.201-201ENST00000364052 96 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-60P-201ENST00000364792 103 ntBASIC1.24□□□□□ -2.21
CD28P10747 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.24□□□□□ -2.21
CD28P10747 RNU6-692P-201ENST00000384496 107 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU11-3P-201ENST00000391111 133 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-321P-201ENST00000410912 106 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-1245P-201ENST00000411130 106 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-293P-201ENST00000411259 106 ntBASIC1.24□□□□□ -2.21
CD28P10747 RN7SKP101-201ENST00000411376 320 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.24□□□□□ -2.21
CD28P10747 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.24□□□□□ -2.21
CD28P10747 RPS20P15-201ENST00000412792 311 ntBASIC1.24□□□□□ -2.21
CD28P10747 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.24□□□□□ -2.21
CD28P10747 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.24□□□□□ -2.21
CD28P10747 AL590556.1-201ENST00000423231 483 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC078809.1-201ENST00000427601 140 ntBASIC1.24□□□□□ -2.21
CD28P10747 AL133396.1-201ENST00000432048 687 ntBASIC1.24□□□□□ -2.21
CD28P10747 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.24□□□□□ -2.21
CD28P10747 AL035666.1-201ENST00000446195 348 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC087884.1-201ENST00000469738 328 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.24□□□□□ -2.21
CD28P10747 AC005840.1-201ENST00000498412 377 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.24□□□□□ -2.21
CD28P10747 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
CD28P10747 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.24□□□□□ -2.21
CD28P10747 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.24□□□□□ -2.21
CD28P10747 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
CD28P10747 RNU6-430P-201ENST00000517078 107 ntBASIC1.24□□□□□ -2.21
CD28P10747 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.24□□□□□ -2.21
CD28P10747 TRAV32-201ENST00000553993 340 ntBASIC1.24□□□□□ -2.21
CD28P10747 SUB1P3-201ENST00000564581 315 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC015720.1-201ENST00000565251 277 ntBASIC1.24□□□□□ -2.21
CD28P10747 MIR3169-201ENST00000578032 83 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC091805.2-201ENST00000603848 235 ntBASIC1.24□□□□□ -2.21
CD28P10747 AP000654.2-201ENST00000605633 586 ntBASIC1.24□□□□□ -2.21
CD28P10747 AC063944.3-201ENST00000609969 533 ntBASIC1.24□□□□□ -2.21
CD28P10747 ZNF680P1-201ENST00000436625 1469 ntBASIC1.24□□□□□ -2.21
CD28P10747 CBX3P1-201ENST00000325243 554 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms