Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTLC1O15269 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.72□□□□□ -1.65
SPTLC1O15269 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SPTLC1O15269 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SPTLC1O15269 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTLC1O15269 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTLC1O15269 RNU1-132P-201ENST00000364300 164 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 SNORA70.4-201ENST00000365509 134 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 U8.12-201ENST00000384701 133 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 MIR554-201ENST00000384874 96 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 SNORD96B-201ENST00000386148 79 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 RNU6-588P-201ENST00000410281 105 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 RNA5SP504-201ENST00000410676 117 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SPTLC1O15269 AIMP1P2-201ENST00000425294 312 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SPTLC1O15269 AP002884.2-201ENST00000471647 395 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 RPL32P34-201ENST00000486380 400 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
SPTLC1O15269 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTLC1O15269 AC002076.2-201ENST00000617362 122 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 uc_338.13-201ENST00000618243 179 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 MIR6075-201ENST00000620782 95 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 U6.115-201ENST00000636045 103 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 MIR492-201ENST00000638676 116 ntBASIC4.71□□□□□ -1.66
SPTLC1O15269 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SPTLC1O15269 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.71□□□□□ -1.66
SPTLC1O15269 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SPTLC1O15269 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.7□□□□□ -1.66
SPTLC1O15269 MIR367-201ENST00000362299 68 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU6-235P-201ENST00000362644 107 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU6-655P-201ENST00000362858 107 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 Y_RNA.310-201ENST00000365063 113 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU1-13P-201ENST00000384499 162 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU6-768P-201ENST00000384683 107 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU2-49P-201ENST00000410666 184 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU6-628P-201ENST00000410675 107 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU7-141P-201ENST00000459304 62 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RNU6-561P-201ENST00000516222 102 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 AP003730.1-201ENST00000524605 285 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 MIR4724-201ENST00000579485 89 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.7□□□□□ -1.66
SPTLC1O15269 MIR4444-1-201ENST00000581696 74 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 MIR4444-2-201ENST00000584390 74 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.7□□□□□ -1.66
SPTLC1O15269 FAM27D1-201ENST00000612308 341 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SPTLC1O15269 AC005086.4-201ENST00000623065 213 ntBASIC4.7□□□□□ -1.66
SPTLC1O15269 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SPTLC1O15269 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTLC1O15269 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTLC1O15269 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SPTLC1O15269 AC010889.1-201ENST00000566193 2666 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
SPTLC1O15269 AC026241.1-201ENST00000517873 2142 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.69□□□□□ -1.66
SPTLC1O15269 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SPTLC1O15269 RNU6-1210P-201ENST00000363775 107 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 Y_RNA.294-201ENST00000364916 102 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 RNU6-144P-201ENST00000383951 107 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 RNU6-643P-201ENST00000384018 107 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 MIR15B-201ENST00000385045 98 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 MT-TT-201ENST00000387460 66 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SPTLC1O15269 RN7SKP202-201ENST00000410439 330 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 AC009237.10-201ENST00000414112 510 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.69□□□□□ -1.66
SPTLC1O15269 AL358232.1-201ENST00000448030 501 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 RNU1-30P-201ENST00000606575 163 ntBASIC4.69□□□□□ -1.66
SPTLC1O15269 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTLC1O15269 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SPTLC1O15269 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.69□□□□□ -1.66
SPTLC1O15269 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SPTLC1O15269 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
SPTLC1O15269 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SPTLC1O15269 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SPTLC1O15269 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTLC1O15269 AC069528.2-201ENST00000624849 1991 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RNU6-1228P-201ENST00000391014 107 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RNA5SP317-201ENST00000410176 116 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RNA5SP311-201ENST00000411290 116 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
SPTLC1O15269 HMGN2P16-201ENST00000456802 261 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RN7SL691P-201ENST00000494487 301 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RNA5SP315-201ENST00000516340 116 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 RNA5SP312-201ENST00000517068 116 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 AC023632.4-201ENST00000517783 191 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SPTLC1O15269 MIR5582-201ENST00000579697 68 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 AC108081.1-201ENST00000604358 221 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 AL137843.1-201ENST00000605078 385 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 AL136164.4-201ENST00000625013 2135 ntBASIC4.68□□□□□ -1.66
SPTLC1O15269 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTLC1O15269 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.68□□□□□ -1.66
SPTLC1O15269 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms