Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 PGBD4P5-201ENST00000445958 426 ntBASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 NDUFA4P2-201ENST00000489989 244 ntBASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 AP000867.2-201ENST00000532468 320 ntBASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 RN7SL703P-201ENST00000578485 302 ntBASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.82□□□□□ -1.48
SPDYE4A6NLX3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 MIR133B-201ENST00000362210 119 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 RNA5SP305-201ENST00000362665 119 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 RNA5SP339-201ENST00000390987 122 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 AC092754.1-201ENST00000472975 479 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 AC091912.1-201ENST00000511351 248 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 RNY4P20-201ENST00000516678 93 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 AP001880.2-201ENST00000538233 448 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 AC002076.2-201ENST00000617362 122 ntBASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SPDYE4A6NLX3 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 AL513477.1-202ENST00000417061 214 ntBASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 RNU6-693P-201ENST00000516134 107 ntBASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 AC011944.2-201ENST00000624440 683 ntBASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SPDYE4A6NLX3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 Y_RNA.342-201ENST00000365352 113 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 HMGN2P8-201ENST00000391458 268 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 Y_RNA.621-201ENST00000411065 96 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 RPL36AP10-201ENST00000421785 322 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 RNU6-830P-201ENST00000516353 107 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 AP001781.1-201ENST00000530977 207 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 BNIP3P1-201ENST00000547295 580 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 AC006349.1-201ENST00000555526 235 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 AC006116.3-201ENST00000592968 361 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 AP000542.2-201ENST00000623199 6179 ntBASIC5.79□□□□□ -1.48
SPDYE4A6NLX3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 Y_RNA.107-201ENST00000363190 121 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RNU1-106P-201ENST00000384382 164 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 MIR105-1-201ENST00000385222 81 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RN7SKP16-201ENST00000410180 299 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 AL354714.3-201ENST00000447284 493 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 snoU13.20-201ENST00000459180 104 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 PARP4P3-201ENST00000510265 317 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RNU2-34P-201ENST00000516534 121 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RN7SKP282-201ENST00000516824 299 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RNU6-1096P-201ENST00000517089 102 ntBASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SPDYE4A6NLX3 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 RNY1P10-201ENST00000363268 113 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 SNORA63D-201ENST00000364359 132 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 MIR520G-201ENST00000385064 90 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 Y_RNA.666-201ENST00000516187 112 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 RNU2-58P-201ENST00000516403 183 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 AC092490.3-201ENST00000545370 572 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 AC074050.1-201ENST00000563247 211 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 RPL10P14-201ENST00000565265 298 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 AC011266.1-201ENST00000624119 3569 ntBASIC5.77□□□□□ -1.49
SPDYE4A6NLX3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms