Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.15□□□□□ -1.75
GPC6Q9Y625 PCGEM1.1-201ENST00000613431 131 ntBASIC4.15□□□□□ -1.75
GPC6Q9Y625 TCL6_2.1-201ENST00000615162 119 ntBASIC4.15□□□□□ -1.75
GPC6Q9Y625 TUG1_4.1-201ENST00000619464 181 ntBASIC4.15□□□□□ -1.75
GPC6Q9Y625 AC068205.3-201ENST00000636385 468 ntBASIC4.15□□□□□ -1.75
GPC6Q9Y625 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.15□□□□□ -1.75
GPC6Q9Y625 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
GPC6Q9Y625 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
GPC6Q9Y625 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
GPC6Q9Y625 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GPC6Q9Y625 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
GPC6Q9Y625 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GPC6Q9Y625 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 RPS16P5-201ENST00000406501 404 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 RNU2-49P-201ENST00000410666 184 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 AP000873.1-201ENST00000463987 400 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 HSPE1P18-201ENST00000517602 280 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 MIR3690-201ENST00000580266 75 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 RPS15AP11-201ENST00000594193 385 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AC244505.7-201ENST00000599675 272 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AL160290.3-201ENST00000604869 165 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AL137843.1-201ENST00000605078 385 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AL391261.4-201ENST00000616012 481 ntBASIC4.14□□□□□ -1.75
GPC6Q9Y625 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
GPC6Q9Y625 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.14□□□□□ -1.75
GPC6Q9Y625 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
GPC6Q9Y625 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GPC6Q9Y625 MIR423-201ENST00000362201 94 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 MIR367-201ENST00000362299 68 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 Y_RNA.40-201ENST00000362645 93 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 Y_RNA.521-201ENST00000384560 114 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RNU1-89P-201ENST00000384592 164 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 MIR659-201ENST00000384963 97 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 MIR616-201ENST00000385293 97 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 MIR147B-201ENST00000390185 80 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 AL355497.1-201ENST00000406262 551 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RPL37P18-201ENST00000411602 243 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RPS12P10-201ENST00000427031 377 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 TBCAP1-201ENST00000436520 327 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 TPT1P12-201ENST00000448968 492 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RNU7-141P-201ENST00000459304 62 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RPS29P22-201ENST00000472363 168 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RPS29P2-201ENST00000479278 136 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 AC145146.1-201ENST00000496370 254 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 AC023141.12-201ENST00000512399 199 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RNU2-58P-201ENST00000516403 183 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 RNU2-56P-201ENST00000516826 190 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 AP004242.1-201ENST00000533701 349 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 AC069200.1-201ENST00000609511 323 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
GPC6Q9Y625 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
GPC6Q9Y625 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
GPC6Q9Y625 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
GPC6Q9Y625 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
GPC6Q9Y625 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GPC6Q9Y625 NOL8P1-201ENST00000508336 3529 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.12□□□□□ -1.75
GPC6Q9Y625 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
GPC6Q9Y625 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GPC6Q9Y625 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
GPC6Q9Y625 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
GPC6Q9Y625 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.12□□□□□ -1.75
GPC6Q9Y625 RNU1-15P-201ENST00000353977 144 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 U3.9-201ENST00000363823 204 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 RNU6-643P-201ENST00000384018 107 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 SNORA1.3-201ENST00000384676 136 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
GPC6Q9Y625 RNA5SP306-201ENST00000411087 107 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 RPL23AP82-202ENST00000427528 469 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 HSPE1P21-201ENST00000438283 308 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 AL441985.1-201ENST00000457727 251 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 RN7SL354P-201ENST00000469282 294 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 RNU4-57P-201ENST00000515980 135 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 RNU6-344P-201ENST00000516635 111 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 AP001781.1-201ENST00000530977 207 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 EIF4A1P12-201ENST00000551910 141 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 LARP7P3-201ENST00000579888 337 ntBASIC4.12□□□□□ -1.75
GPC6Q9Y625 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.12□□□□□ -1.75
GPC6Q9Y625 MIR6891-201ENST00000618788 93 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms