Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1205P-201ENST00000363625 106 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RNY3P5-201ENST00000384127 102 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RNA5SP397-201ENST00000391323 118 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AL606845.1-201ENST00000404881 255 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RNU6-1077P-201ENST00000410506 102 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC244670.1-201ENST00000436879 112 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 HMGB1P37-201ENST00000439613 609 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AL714022.1-201ENST00000439897 151 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC011276.1-201ENST00000469688 323 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC109327.1-201ENST00000471666 403 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 SNORA31.1-201ENST00000515993 133 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 SNORA31.5-201ENST00000516190 133 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 Y_RNA.692-201ENST00000516627 105 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AP001781.1-201ENST00000530977 207 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC006199.1-201ENST00000548728 219 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 IPO5P1-202ENST00000600039 287 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC012640.5-201ENST00000623897 319 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 AC008555.8-201ENST00000623602 2168 ntBASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CUEDC1Q9NWM3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CUEDC1Q9NWM3 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CUEDC1Q9NWM3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CUEDC1Q9NWM3 RNY1P11-201ENST00000363759 113 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 RN7SKP280-201ENST00000364196 304 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.229-201ENST00000364347 113 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.456-201ENST00000384232 111 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 NDUFS5P4-201ENST00000412983 318 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 RPS26P2-201ENST00000440331 348 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AL158147.1-201ENST00000443970 75 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AL031737.1-201ENST00000450125 223 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.677-201ENST00000516401 85 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 CKS1BP7-201ENST00000522230 235 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 AC025946.2-201ENST00000603398 234 ntBASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CUEDC1Q9NWM3 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-454P-201ENST00000364292 107 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-144P-201ENST00000383951 107 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 SNORA18.3-201ENST00000384122 132 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-198P-201ENST00000384258 104 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 MIR548A3-201ENST00000385297 97 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 AL031003.1-201ENST00000404229 172 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 AC009237.10-201ENST00000414112 510 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 AC010099.1-201ENST00000455434 375 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-711P-201ENST00000517255 106 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 MIR4724-201ENST00000579485 89 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 AC091979.2-201ENST00000607514 214 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.39□□□□□ -1.71
CUEDC1Q9NWM3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.35-201ENST00000362601 101 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-799P-201ENST00000363567 107 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 SNORD115-30-201ENST00000364117 82 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 Y_RNA.294-201ENST00000364916 102 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 MIR591-201ENST00000385290 95 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 SNORD96B-201ENST00000386148 79 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 MT-TT-201ENST00000387460 66 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC015795.1-201ENST00000513669 327 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-561P-201ENST00000516222 102 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 RNU6-537P-201ENST00000517277 103 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC133485.4-201ENST00000561835 220 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC138907.4-201ENST00000570107 226 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC020895.1-201ENST00000595362 272 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 SNRPGP20-201ENST00000604477 205 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 SNX18P1Y-201ENST00000616231 511 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 MIR6134-201ENST00000617606 109 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 U6.98-201ENST00000637157 84 ntBASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CUEDC1Q9NWM3 AC007656.2-201ENST00000624902 4547 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms