Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF39Q9H2S5 TEK-204ENST00000519097 3836 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 RNU6-335P-201ENST00000364563 113 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 HMGN2P34-201ENST00000437647 269 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AZGP1P2-201ENST00000454506 345 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC112771.1-201ENST00000463581 102 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 RN7SL41P-201ENST00000476144 297 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC006483.1-201ENST00000487308 313 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 RN7SL808P-201ENST00000496066 299 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC134698.5-201ENST00000519444 336 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AP004607.2-201ENST00000533949 322 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC122688.1-201ENST00000541494 223 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 AL356489.2-201ENST00000566968 3528 ntBASIC5.92□□□□□ -1.46
RNF39Q9H2S5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF39Q9H2S5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SNORA74A-201ENST00000364089 198 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SNORD113-4-201ENST00000364802 75 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SNORA70-201ENST00000384436 135 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RNU6-1067P-201ENST00000384752 107 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SNORA26.6-201ENST00000391256 115 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RN7SKP202-201ENST00000410439 330 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RNU6-602P-201ENST00000411155 105 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 AL139247.1-201ENST00000422768 325 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 KRT8P51-201ENST00000438938 274 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RNU7-48P-201ENST00000458875 63 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SNORD67.1-201ENST00000516618 108 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 SCARNA16.4-201ENST00000516956 187 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RNU6-709P-201ENST00000517257 104 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 IGLV3-17-201ENST00000519099 244 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 RPL10P14-201ENST00000565265 298 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 MIR3675-201ENST00000583661 73 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC5.91□□□□□ -1.46
RNF39Q9H2S5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RNF39Q9H2S5 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 RN7SKP192-201ENST00000411291 327 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 RN7SL504P-201ENST00000494496 287 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 RN7SL447P-201ENST00000494711 245 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 RN7SL591P-201ENST00000496150 292 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 DNAJC19P9-201ENST00000555084 351 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 MIR4536-1-201ENST00000583537 88 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 AC104996.3-201ENST00000590718 94 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 U2.20-201ENST00000613956 192 ntBASIC5.9□□□□□ -1.46
RNF39Q9H2S5 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
RNF39Q9H2S5 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.9□□□□□ -1.47
RNF39Q9H2S5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF39Q9H2S5 AC239868.2-201ENST00000564237 4527 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RNF39Q9H2S5 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF39Q9H2S5 RNU1-43P-201ENST00000365052 165 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 Y_RNA.379-201ENST00000365653 102 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 BX284632.1-201ENST00000478218 541 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 RNU6-928P-201ENST00000516876 104 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 RNU7-128P-201ENST00000517247 62 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 RNA5SP373-201ENST00000517271 95 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 HMGB1P40-201ENST00000525121 540 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 TRAV8-5-201ENST00000537369 341 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 MIR3691-201ENST00000578066 90 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 AC106800.4-201ENST00000614905 153 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 MIR7155-201ENST00000615925 56 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 MIR6717-201ENST00000622747 73 ntBASIC5.89□□□□□ -1.47
RNF39Q9H2S5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RNF39Q9H2S5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.89□□□□□ -1.47
RNF39Q9H2S5 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RNF39Q9H2S5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms