Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-1312P-201ENST00000362425 108 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 Y_RNA.66-201ENST00000362862 102 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU4-41P-201ENST00000364426 143 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 UBBP2-201ENST00000376781 231 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-444P-201ENST00000383988 108 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR34C-201ENST00000384831 77 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR520G-201ENST00000385064 90 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR520H-201ENST00000385126 88 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA40.6-201ENST00000391153 128 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA26-201ENST00000391286 122 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AP000567.1-201ENST00000406413 156 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL023807.1-201ENST00000407932 359 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR1236-201ENST00000408340 102 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-519P-201ENST00000410590 108 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA7.5-201ENST00000410672 110 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC112220.1-201ENST00000434628 355 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC018634.1-201ENST00000437554 401 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 HMGN3P1-201ENST00000453847 193 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC087588.1-201ENST00000462203 316 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC008481.1-201ENST00000463278 396 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNA5SP519-201ENST00000516480 119 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-1198P-201ENST00000516904 67 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-980P-201ENST00000516925 103 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 IGKV3OR22-2-201ENST00000517943 313 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 IGKV1-32-201ENST00000519290 311 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 DEFB108D-201ENST00000527787 222 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RN7SL600P-201ENST00000581811 299 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR548Y-201ENST00000582739 110 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR4660-201ENST00000583549 74 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL355812.1-201ENST00000603215 216 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL138963.2-201ENST00000605137 226 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL591034.3-201ENST00000605511 685 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AL590099.1-201ENST00000615276 138 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AP005019.3-201ENST00000620418 560 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC002064.3-201ENST00000623448 346 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RNA5SP196-201ENST00000625967 102 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 AC133552.1-201ENST00000569988 4007 ntBASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
KRTAP4-3Q9BYR4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-349P-201ENST00000362402 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-940P-201ENST00000363433 104 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-674P-201ENST00000363831 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 Y_RNA.179-201ENST00000363844 90 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-336P-201ENST00000364891 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-384P-201ENST00000364900 104 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 Y_RNA.361-201ENST00000365515 120 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNA5SP283-201ENST00000365604 119 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU1-63P-201ENST00000383902 164 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORA29-201ENST00000384183 140 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 SNORD116-24-201ENST00000384549 92 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 MIR134-201ENST00000385258 73 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-696P-201ENST00000390834 107 ntBASIC1.5□□□□□ -2.17
KRTAP4-3Q9BYR4 RNU6-750P-201ENST00000390946 107 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms